RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA631119" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 4 ✖

bioproject 1

  • PRJNA631119 · 4 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10807530 10807530 PRJNA631119_P_NODE_8129_length_415_cov_2.885965_g8011_i0 PRJNA631119 8129 415 2.885965 11.97675475 Solumvirus sp. 2487773 Viruses Viruses 86.7 8.21e-18   NR AYV86227.1 2487773 g8011 i0 81.5 0.390361445783133 54 9 39 1 1 162 125 177 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 162 86.7 1 Viruses Pithoviruses             Solumvirus sp.
27713099 27713099 PRJNA631119_P_NODE_27064_length_264_cov_3.994764_g26946_i0 PRJNA631119 27064 264 3.994764 10.54617696 Solumvirus sp. 2487773 Viruses Viruses 108 4.0400000000000005e-27   NR AYV86227.1 2487773 g26946 i0 65.1 0.943181818181818 83 29 94.3 0 263 15 49 131 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 249 108 1 Viruses Pithoviruses             Solumvirus sp.
29512258 29512258 PRJNA631119_P_NODE_30310_length_252_cov_3.067039_g30192_i0 PRJNA631119 30310 252 3.067039 7.72893828 Solumvirus sp. 2487773 Viruses Viruses 85.9 2.31e-18   NR AYV86227.1 2487773 g30192 i0 58.4 0.916666666666667 77 30 89.3 1 28 252 28 104 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 231 85.9 1 Viruses Pithoviruses             Solumvirus sp.
30428804 30428804 PRJNA631119_P_NODE_15173_length_328_cov_2.713725_g15055_i0 PRJNA631119 15173 328 2.713725 8.901018 Solumvirus sp. 2487773 Viruses Viruses 106 5.15e-26   NR AYV86227.1 2487773 g15055 i0 69.3 0.685975609756098 75 18 64 1 326 117 113 187 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 225 106 1 Viruses Pithoviruses             Solumvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;