RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA631119", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 5 ✖

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA631119 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1879479 1879479 PRJNA631119_P_NODE_6042_length_468_cov_1.939241_g5924_i0 PRJNA631119 6042 468 1.939241 9.07564788 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 269 4.6e-90   NR XP_068369233.1 1144522 g5924 i0 83.4 0.967948717948718 151 25 96.8 0 455 3 1 151 XP_068369233.1 Peptidyl-prolyl cis-trans isomerase 7 [Tritrichomonas foetus] diamond 453 269 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
4431056 4431056 PRJNA631119_P_NODE_8804_length_402_cov_2.148936_g8686_i0 PRJNA631119 8804 402 2.148936 8.63872272 Trichonympha agilis 63628 Parabasalia other_Eukaryota 178 6.86e-51   NR BAC98826.1 63628 g8686 i0 63.4 1.98507462686567 134 49 100 0 1 402 140 273 BAC98826.1 enolase [Trichonympha agilis] diamond 798 178 1 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha agilis
29228493 29228493 PRJNA631119_P_NODE_33569_length_248_cov_0.880000_g33451_i0 PRJNA631119 33569 248 0.88 2.1824 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 44.7 0.00844   NR XP_068349620.1 1144522 g33451 i0 40.9 1.91129032258065 44 26 53.2 0 115 246 427 470 XP_068349620.1 uncharacterized protein TRFO_37341 [Tritrichomonas foetus] diamond 474 44.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31344934 31344934 PRJNA631119_P_NODE_21876_length_287_cov_2.359813_g21758_i0 PRJNA631119 21876 287 2.359813 6.77266331 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 82.8 2.84e-18   NR XP_067772230.1 135588 g21758 i0 52.5 0.637630662020906 61 29 63.8 0 282 100 37 97 XP_067772230.1 uncharacterized protein GO595_007667 [Histomonas meleagridis] diamond 183 82.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
32547263 32547263 PRJNA631119_P_NODE_39659_length_240_cov_2.676647_g39541_i0 PRJNA631119 39659 240 2.676647 6.4239528 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 93.2 1.2e-22   NR XP_067772230.1 135588 g39541 i0 58.7 0.7875 63 26 78.8 0 235 47 35 97 XP_067772230.1 uncharacterized protein GO595_007667 [Histomonas meleagridis] diamond 189 93.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;