contig_metadata
11 rows where bioproject = "PRJNA631119", tax_clade = "Metamonada" and tax_phylum = "Fornicata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26618625 | 26618625 | PRJNA631119_P_NODE_5341_length_492_cov_3.706444_g5223_i0 | PRJNA631119 | 5341 | 492 | 3.706444 | 18.23570448 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 124 | 1.49e-29 | NR | CAK8748659.1 | 28002 | g5223 | i0 | 39.5 | 20.359756097561 | 167 | 89 | 98.2 | 4 | 489 | 7 | 1781 | 1941 | CAK8748659.1 HINF_038578 [Hexamita inflata] | diamond | 10017 | 125 | 0.992 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Hexamita | Hexamita inflata | |||
| 27238871 | 27238871 | PRJNA631119_P_NODE_37603_length_243_cov_0.905882_g37485_i0 | PRJNA631119 | 37603 | 243 | 0.905882 | 2.20129326 | Giardia intestinalis | 5741 | Fornicata | other_Eukaryota | 47.8 | 6.52e-4 | NR | ESU41734.1 | 5741 | g37485 | i0 | 28.2 | 1.04938271604938 | 85 | 42 | 86.4 | 3 | 34 | 243 | 110 | 190 | ESU41734.1 Variant-specific surface protein, partial [Giardia intestinalis] | diamond | 255 | 47.8 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia duodenalis | |||
| 27302247 | 27302247 | PRJNA631119_P_NODE_19723_length_298_cov_2.040000_g19605_i0 | PRJNA631119 | 19723 | 298 | 2.04 | 6.0792 | Giardia lamblia P15 | 658858 | Fornicata | other_Eukaryota | 50.8 | 1.01e-4 | NR | EFO64479.1 | 658858 | g19605 | i0 | 40 | 0.553691275167785 | 55 | 33 | 55.4 | 0 | 264 | 100 | 110 | 164 | EFO64479.1 Topoisomerase I-related protein [Giardia lamblia P15] | diamond | 165 | 50.8 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia duodenalis | |||
| 28217587 | 28217587 | PRJNA631119_P_NODE_13466_length_343_cov_1.140741_g13348_i0 | PRJNA631119 | 13466 | 343 | 1.140741 | 3.91274163 | Aduncisulcus paluster | 2918883 | Fornicata | other_Eukaryota | 84 | 4.09e-16 | NR | GKT15179.1 | 2918883 | g13348 | i0 | 45.3 | 0.752186588921283 | 86 | 43 | 71.7 | 1 | 257 | 12 | 219 | 304 | GKT15179.1 Tubulin-tyrosine ligase/Tubulin polyglutamylase like protein [Aduncisulcus paluster] | diamond | 258 | 84 | 1 | Eukaryota | Metamonada | Fornicata | Aduncisulcus | Aduncisulcus paluster | |||||
| 28672583 | 28672583 | PRJNA631119_P_NODE_25807_length_270_cov_1.289340_g25689_i0 | PRJNA631119 | 25807 | 270 | 1.28934 | 3.481218 | Giardia | 5740 | Fornicata | other_Eukaryota | 43.1 | 0.0386 | NR | ESU43064.1 | 5741 | g25689 | i0 | 35.4 | 1.75555555555556 | 79 | 41 | 82.2 | 4 | 267 | 46 | 213 | 286 | ESU43064.1 Variant-specific surface protein [Giardia intestinalis] | diamond | 474 | 43.1 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia duodenalis | |||
| 29525085 | 29525085 | PRJNA631119_P_NODE_1910_length_769_cov_3.001437_g1806_i0 | PRJNA631119 | 1910 | 769 | 3.001437 | 23.08105053 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 54.7 | 1.79e-4 | NR | TNJ26588.1 | 5742 | g1806 | i0 | 38.9 | 0.93628088426528 | 72 | 43 | 27.7 | 1 | 739 | 527 | 118 | 189 | TNJ26588.1 pVSP [Giardia muris] | diamond | 720 | 54.7 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia muris | |||
| 29828073 | 29828073 | PRJNA631119_P_NODE_4371_length_534_cov_10.757050_g4256_i0 | PRJNA631119 | 4371 | 534 | 10.75705 | 57.442647 | Carpediemonas membranifera | 201153 | Fornicata | other_Eukaryota | 112 | 1.03e-27 | NR | KAG9392754.1 | 201153 | g4256 | i0 | 39.7 | 0.97752808988764 | 174 | 90 | 95.5 | 7 | 529 | 20 | 1 | 163 | KAG9392754.1 Translationally controlled tumor protein [Carpediemonas membranifera] | diamond | 522 | 112 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera | |||||
| 31313194 | 31313194 | PRJNA631119_P_NODE_25975_length_269_cov_1.571429_g25857_i0 | PRJNA631119 | 25975 | 269 | 1.571429 | 4.22714401 | Carpediemonas membranifera | 201153 | Fornicata | other_Eukaryota | 50.1 | 1.34e-4 | NR | KAG9394526.1 | 201153 | g25857 | i0 | 41.3 | 0.702602230483271 | 63 | 34 | 70.3 | 1 | 80 | 268 | 4 | 63 | KAG9394526.1 Helicase associated domain (HA2) [Carpediemonas membranifera] | diamond | 189 | 50.1 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera | |||||
| 31756001 | 31756001 | PRJNA631119_P_NODE_16457_length_319_cov_0.906504_g16339_i0 | PRJNA631119 | 16457 | 319 | 0.906504 | 2.89174776 | Carpediemonas membranifera | 201153 | Fornicata | other_Eukaryota | 176 | 3.36e-50 | NR | KAG9389646.1 | 201153 | g16339 | i0 | 73.3 | 14.8119122257053 | 105 | 28 | 98.7 | 0 | 317 | 3 | 414 | 518 | KAG9389646.1 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit [Carpediemonas membranifera] | diamond | 4725 | 176 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera | |||||
| 32357442 | 32357442 | PRJNA631119_P_NODE_20959_length_292_cov_1.374429_g20841_i0 | PRJNA631119 | 20959 | 292 | 1.374429 | 4.01333268 | Kipferlia bialata | 797122 | Fornicata | other_Eukaryota | 106 | 1.4e-26 | NR | GIQ86888.1 | 797122 | g20841 | i0 | 49 | 2.96917808219178 | 96 | 49 | 98.6 | 0 | 289 | 2 | 26 | 121 | GIQ86888.1 hypothetical protein KIPB_008819 [Kipferlia bialata] | diamond | 867 | 106 | 1 | Eukaryota | Metamonada | Fornicata | Kipferlia | Kipferlia bialata | |||||
| 32528186 | 32528186 | PRJNA631119_P_NODE_41279_length_197_cov_4.298387_g41161_i0 | PRJNA631119 | 41279 | 197 | 4.298387 | 8.46782239 | root | 1 | Root_unresolved | Root_unresolved | 81.6 | 1e-17 | NR | CAK8762026.1 | 28002 | g41161 | i0 | 66.7 | 9.60913705583756 | 57 | 19 | 86.8 | 0 | 172 | 2 | 1 | 57 | CAK8762026.1 HINF_004475 [Hexamita inflata] | diamond | 1893 | 81.6 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Hexamita | Hexamita inflata |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;