RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA631119", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA631119 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27207065 27207065 PRJNA631119_P_NODE_26882_length_265_cov_1.843750_g26764_i0 PRJNA631119 26882 265 1.84375 4.8859375 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 61.6 1.08e-8   NR MBI2425232.1 2030809 g26764 i0 34.1 1.93584905660377 85 56 96.2 0 262 8 325 409 MBI2425232.1 aspartate aminotransferase family protein [Candidatus Hydrogenedentota bacterium] diamond 513 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27807629 27807629 PRJNA631119_P_NODE_14684_length_332_cov_1.783784_g14566_i0 PRJNA631119 14684 332 1.783784 5.92216288 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 97.1 4.83e-21   NR MFP4500920.1 2030809 g14566 i0 46.8 0.984939759036145 109 46 98.5 2 332 6 29 125 MFP4500920.1 DEAD/DEAH box helicase [Candidatus Hydrogenedentota bacterium] diamond 327 97.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28041082 28041082 PRJNA631119_P_NODE_21625_length_289_cov_1.069444_g21507_i0 PRJNA631119 21625 289 1.069444 3.09069316 FCB group 1783270 Bacteria Bacteria 152 1.81e-42   NR MCH7959667.1 2030809 g21507 i0 78.5 5.88581314878893 93 20 96.5 0 279 1 136 228 MCH7959667.1 lipid-transfer protein [Candidatus Hydrogenedentota bacterium] diamond 1701 152 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31217911 31217911 PRJNA631119_P_NODE_16355_length_319_cov_2.113821_g16237_i0 PRJNA631119 16355 319 2.113821 6.74308899 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 51.6 7.39e-5   NR MBI2423385.1 2030809 g16237 i0 40 0.564263322884012 60 34 54.5 1 7 180 1421 1480 MBI2423385.1 exo-alpha-sialidase [Candidatus Hydrogenedentota bacterium] diamond 180 51.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;