RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA631119", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA631119 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27302242 27302242 PRJNA631119_P_NODE_12823_length_349_cov_1.380435_g12705_i0 PRJNA631119 12823 349 1.380435 4.81771815 Balneolaceae bacterium 2053516 Bacteria Bacteria 49.3 6.83e-5   NR MEX0660162.1 2053516 g12705 i0 31.6 1.31518624641834 76 52 65.3 0 329 102 19 94 MEX0660162.1 acylphosphatase [Balneolaceae bacterium] diamond 459 49.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
31471558 31471558 PRJNA631119_P_NODE_9116_length_397_cov_1.308642_g8998_i0 PRJNA631119 9116 397 1.308642 5.19530874 Balneolales bacterium 2497613 Bacteria Bacteria 109 4.76e-25   NR HKJ30596.1 2497613 g8998 i0 42.6 0.974811083123426 129 65 91.4 4 35 397 34 161 HKJ30596.1 phosphatidylinositol-specific phospholipase C domain-containing protein [Balneolales bacterium] diamond 387 109 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
32104011 32104011 PRJNA631119_P_NODE_32618_length_249_cov_0.875000_g32500_i0 PRJNA631119 32618 249 0.875 2.17875 Fodinibius sp. 1872440 Bacteria Bacteria 45.1 0.00568   NR HLR33082.1 1872440 g32500 i0 37.3 0.903614457831325 75 42 90.4 2 239 15 43 112 HLR33082.1 dihydrodipicolinate synthase family protein [Fodinibius sp.] diamond 225 45.1 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;