RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA631119", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA631119 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29335538 29335538 PRJNA631119_P_NODE_18429_length_306_cov_1.296137_g18311_i0 PRJNA631119 18429 306 1.296137 3.96617922 Bacteria 2 Bacteria Bacteria 43.5 0.0419   NR MEO8691848.1 1917697 g18311 i0 37.7 2.09803921568627 53 33 52 0 46 204 42 94 MEO8691848.1 choice-of-anchor U domain-containing protein [Candidatus Saccharimonas sp.] diamond 642 43.9 0.990888382687927 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
29891474 29891474 PRJNA631119_P_NODE_10791_length_372_cov_1.491639_g10673_i0 PRJNA631119 10791 372 1.491639 5.54889708 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 52 6.7e-5   NR MCA9324640.1 2026720 g10673 i0 33.3 0.991935483870968 123 66 87.9 5 342 16 8 128 MCA9324640.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 369 52 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32369951 32369951 PRJNA631119_P_NODE_39799_length_238_cov_3.084848_g39681_i0 PRJNA631119 39799 238 3.084848 7.34193824 Bacteria 2 Bacteria Bacteria 53.9 3.87e-6   NR MCL2280671.1 2026720 g39681 i0 46.2 2.91176470588235 78 30 98.3 2 2 235 49 114 MCL2280671.1 molecular chaperone DnaJ [Candidatus Saccharibacteria bacterium] diamond 693 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;