RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA630877", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Lenarviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630877 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603085 603085 PRJNA630877_S_NODE_74721_length_322_cov_1.658363_g55584_i0 PRJNA630877 74721 322 1.658363 5.33992886 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 263 1.28e-65   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g55584 i0 81.595 1.01242236024845 326 52 100 6 1 322 588 909 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 326 263 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
13357326 13357326 PRJNA630877_S_NODE_72911_length_333_cov_1.304795_g53774_i0 PRJNA630877 72911 333 1.304795 4.34496735 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 287 7.9e-73   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g53774 i0 83.548 0.930930930930931 310 47 92 3 3 310 1685 1378 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 310 287 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
18455175 18455175 PRJNA630877_S_NODE_114515_length_198_cov_2.216561_g95378_i0 PRJNA630877 114515 198 2.216561 4.38879078 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 154 4.5700000000000005e-33   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g95378 i0 85.235 0.752525252525252 149 22 75 0 21 169 1925 1777 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 149 154 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
18455186 18455186 PRJNA630877_S_NODE_75595_length_317_cov_1.576087_g56458_i0 PRJNA630877 75595 317 1.576087 4.99619579 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 224 5.949999999999999e-54   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g56458 i0 79.56 1.00315457413249 318 61 99 3 1 316 1004 1319 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 318 224 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
21005525 21005525 PRJNA630877_S_NODE_77757_length_305_cov_3.477273_g58620_i0 PRJNA630877 77757 305 3.477273 10.60568265 Penicillium citrinum ourmia-like virus 1 2485924 Viruses Viruses 119 1.26e-28   NR YP_010797622.1 2485924 g58620 i0 58.3 2.94098360655738 103 39 98.4 2 4 303 28 129 YP_010797622.1 RNA-dependent RNA polymerase [Penicillium citrinum ourmia-like virus 1] diamond 897 119 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Magoulivirus Magoulivirus penicillii
27901914 27901914 PRJNA630877_S_NODE_88465_length_260_cov_2.917808_g69328_i0 PRJNA630877 88465 260 2.917808 7.5863008 Henan mito-like virus 24 2937099 Viruses Viruses 47.8 7.87e-4   NR UPW42100.1 2937099 g69328 i0 34.8 0.761538461538461 66 41 73.8 1 22 213 41 106 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 198 47.8 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24
30270698 30270698 PRJNA630877_S_NODE_138352_length_168_cov_5.267717_g119215_i0 PRJNA630877 138352 168 5.267717 8.84976456 Botourmiaviridae sp. 2808997 Viruses Viruses 81.6 2.68e-16   NR UJQ91998.1 2808997 g119215 i0 69.2 1.91071428571429 52 16 92.9 0 4 159 133 184 UJQ91998.1 MAG: putative RNA-dependent RNA polymerase, partial [Botourmiaviridae sp.] diamond 321 81.6 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
31376590 31376590 PRJNA630877_S_NODE_137556_length_169_cov_2.062500_g118419_i0 PRJNA630877 137556 169 2.0625 3.485625 Downy mildew lesion associated splipalmivirus 6 2719531 Viruses Viruses 51.2 6.74e-6   NR WNA22216.1 2719531 g118419 i0 46.6 1.02958579881657 58 25 92.3 1 14 169 1 58 WNA22216.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 6] diamond 174 51.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 6
31660940 31660940 PRJNA630877_S_NODE_51097_length_553_cov_2.839844_g32401_i0 PRJNA630877 51097 553 2.839844 15.70433732 Henan mito-like virus 24 2937099 Viruses Viruses 147 1.5e-37   NR UPW42100.1 2937099 g32401 i0 71.1 0.52622061482821 97 28 52.6 0 357 67 393 489 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 291 147 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24
31882434 31882434 PRJNA630877_S_NODE_49797_length_574_cov_2.258912_g31256_i0 PRJNA630877 49797 574 2.258912 12.96615488 Henan mito-like virus 24 2937099 Viruses Viruses 198 5.8599999999999985e-56   NR UPW42100.1 2937099 g31256 i0 72.6 0.705574912891986 135 37 70.6 0 168 572 180 314 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 405 198 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24
32103979 32103979 PRJNA630877_S_NODE_128298_length_179_cov_2.514493_g109161_i0 PRJNA630877 128298 179 2.514493 4.50094247 Henan mito-like virus 24 2937099 Viruses Viruses 66.2 8.06e-11   NR UPW42100.1 2937099 g109161 i0 59.1 0.737430167597765 44 18 73.7 0 133 2 520 563 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 132 66.2 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24
32830525 32830525 PRJNA630877_S_NODE_58860_length_451_cov_3.043902_g39772_i0 PRJNA630877 58860 451 3.043902 13.72799802 Henan mito-like virus 24 2937099 Viruses Viruses 216 1.44e-63   NR UPW42100.1 2937099 g39772 i0 76.8 0.944567627494457 142 33 94.5 0 2 427 558 699 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 426 216 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;