RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA630877" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630877 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27713078 27713078 PRJNA630877_S_NODE_74364_length_324_cov_2.201413_g55227_i0 PRJNA630877 74364 324 2.201413 7.13257812 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.3 0.0192   NR MFA5115065.1 2035772 g55227 i0 39 1.09259259259259 59 32 50.9 3 239 75 81 139 MFA5115065.1 endonuclease III domain-containing protein [Candidatus Omnitrophota bacterium] diamond 354 44.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28470584 28470584 PRJNA630877_S_NODE_9486_length_2249_cov_6.140399_g5154_i0 PRJNA630877 9486 2249 6.140399 138.09757351 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 51.6 0.0115   NR MCG8431411.1 2035772 g5154 i0 40 0.133392618941752 100 51 13.2 3 1710 2006 263 354 MCG8431411.1 reverse transcriptase family protein [Candidatus Omnitrophota bacterium] diamond 300 51.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;