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contig_metadata

23 rows where bioproject = "PRJNA630877" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630877 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4430823 4430823 PRJNA630877_S_NODE_45484_length_650_cov_12.014778_g27139_i1 PRJNA630877 45484 650 12.014778 78.096057 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 989 0   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g27139 i1 94.172 106.669230769231 652 33 99 5 3 650 3558777 3558127 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 69335 989 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
5706716 5706716 PRJNA630877_S_NODE_103945_length_218_cov_2.231638_g84808_i0 PRJNA630877 103945 218 2.231638 4.86497084 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 331 2.21e-86   NTclustered gi|2874253885|emb|OY970060.1| 171953 g84808 i0 94.037 18.8073394495413 218 13 100 0 1 218 4841925 4841708 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 4100 331 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6981553 6981553 PRJNA630877_S_NODE_111546_length_203_cov_1.956790_g92409_i0 PRJNA630877 111546 203 1.95679 3.9722837 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 261 2.7000000000000007e-65   NTclustered gi|2874253885|emb|OY970060.1| 171953 g92409 i0 89.756 128.320197044335 205 19 100 2 1 203 4840574 4840778 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 26049 261 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6981560 6981560 PRJNA630877_S_NODE_156466_length_153_cov_1.178571_g137329_i0 PRJNA630877 156466 153 1.178571 1.80321363 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 250 4.14e-62   NTclustered gi|2874253796|emb|OY969780.1| 194844 g137329 i0 96.078 61.5882352941176 153 6 100 0 1 153 285252 285100 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 blastn 9423 250 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
10807316 10807316 PRJNA630877_S_NODE_91489_length_250_cov_7.947368_g72352_i0 PRJNA630877 91489 250 7.947368 19.86842 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 285 2.05e-72   NTclustered gi|76574293|gb|DQ139441.1| 171953 g72352 i0 87.449 309.188 247 31 99 0 4 250 305 59 Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence blastn 77297 285 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
12082562 12082562 PRJNA630877_S_NODE_160690_length_150_cov_1.165138_g141553_i0 PRJNA630877 160690 150 1.165138 1.747707 Edaphobacter paludis 3035702 Bacteria Bacteria 250 4.04e-62   NTclustered gi|2737763816|gb|CP121194.1| 3035702 g141553 i0 96.667 52.14 150 5 100 0 1 150 661304 661155 Edaphobacter paludis strain DSM 109919 chromosome, complete genome blastn 7821 250 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter paludis
12630827 12630827 PRJNA630877_S_NODE_45590_length_648_cov_12.257002_g27667_i0 PRJNA630877 45590 648 12.257002 79.42537296 Pseudomonadati 3379134 Bacteria Bacteria 946 0   NTclustered gi|2874253750|emb|OY969625.1| 194844 g27667 i0 93.077 108.983024691358 650 40 100 5 1 648 2136 1490 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09495.bin.1.66 genome assembly, chromosome: 1 blastn 70621 946 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
15905941 15905941 PRJNA630877_S_NODE_71953_length_338_cov_14.158249_g52816_i0 PRJNA630877 71953 338 14.158249 47.85488162 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 501 2.64e-137   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g52816 i0 93.491 107.532544378698 338 21 100 1 1 338 3558114 3558450 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 36346 501 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
18455190 18455190 PRJNA630877_S_NODE_84775_length_274_cov_1.158798_g65638_i0 PRJNA630877 84775 274 1.158798 3.17510652 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 385 2.18e-102   NTclustered gi|338189354|gb|JF989862.1| 171953 g65638 i0 92.593 77.3576642335766 270 16 98 3 1 268 225 492 Uncultured Acidobacteria bacterium clone Paddy_500_9163 16S ribosomal RNA gene, partial sequence blastn 21196 385 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
22280241 22280241 PRJNA630877_S_NODE_88018_length_262_cov_1.597285_g68881_i0 PRJNA630877 88018 262 1.597285 4.1848867 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 316 7.679999999999998e-82   NTclustered gi|217038907|gb|EU810998.1| 171953 g68881 i0 89.147 136.629770992366 258 22 97 6 1 255 332 78 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 35797 316 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26859716 26859716 PRJNA630877_S_NODE_142981_length_164_cov_1.609756_g123844_i0 PRJNA630877 142981 164 1.609756 2.63999984 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0131   NR MEO8379456.1 1978231 g123844 i0 38.1 0.768292682926829 42 24 76.8 1 145 20 3405 3444 MEO8379456.1 Ig-like domain-containing protein [Acidobacteriota bacterium] diamond 126 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26859722 26859722 PRJNA630877_S_NODE_91001_length_252_cov_1.810427_g71864_i0 PRJNA630877 91001 252 1.810427 4.56227604 Terriglobales bacterium 2282142 Bacteria Bacteria 42.7 0.0423   NR HLO07340.1 2282142 g71864 i0 40.7 0.702380952380952 59 34 70.2 1 73 249 1 58 HLO07340.1 DUF885 domain-containing protein [Terriglobales bacterium] diamond 177 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27143656 27143656 PRJNA630877_S_NODE_109162_length_208_cov_1.041916_g90025_i0 PRJNA630877 109162 208 1.041916 2.16718528 Acidobacteriota bacterium 1978231 Bacteria Bacteria 80.5 2.94e-16   NR MCY3928488.1 1978231 g90025 i0 52.2 0.966346153846154 67 32 96.6 0 6 206 30 96 MCY3928488.1 hypothetical protein [Acidobacteriota bacterium] diamond 201 80.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27302234 27302234 PRJNA630877_S_NODE_123543_length_185_cov_2.229167_g104406_i0 PRJNA630877 123543 185 2.229167 4.12395895 Terriglobia bacterium 2081523 Bacteria Bacteria 42.7 0.017   NR HVB29812.1 2081523 g104406 i0 40 1.62162162162162 50 29 79.5 1 174 28 43 92 HVB29812.1 GTP 3',8-cyclase MoaA [Terriglobia bacterium] diamond 300 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
28660019 28660019 PRJNA630877_S_NODE_107267_length_211_cov_2.705882_g88130_i0 PRJNA630877 107267 211 2.705882 5.70941102 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 40.8 0.0406   NR HEX6731931.1 2283092 g88130 i0 46.2 0.554502369668246 39 21 55.5 0 126 10 59 97 HEX6731931.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 117 40.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28912216 28912216 PRJNA630877_S_NODE_83208_length_280_cov_2.384937_g64071_i0 PRJNA630877 83208 280 2.384937 6.6778236 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 42.4 0.032   NR HTC42095.1 2952895 g64071 i0 34 0.535714285714286 50 33 53.6 0 45 194 86 135 HTC42095.1 bleomycin resistance family protein [Candidatus Acidiferrales bacterium] diamond 150 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
29543825 29543825 PRJNA630877_S_NODE_80150_length_294_cov_1.332016_g61013_i0 PRJNA630877 80150 294 1.332016 3.91612704 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 53.9 8.32e-6   NR MBV8073763.1 2052142 g61013 i0 45.2 1.18367346938776 62 19 48 1 189 49 655 716 MBV8073763.1 RNA-directed DNA polymerase [Acidobacteriaceae bacterium] diamond 348 53.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30649317 30649317 PRJNA630877_S_NODE_121553_length_188_cov_1.496599_g102416_i0 PRJNA630877 121553 188 1.496599 2.81360612 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.00251   NR HSQ53421.1 1978231 g102416 i0 36.7 0.957446808510638 60 37 95.7 1 4 183 26 84 HSQ53421.1 30S ribosomal protein S4e [Acidobacteriota bacterium] diamond 180 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30680948 30680948 PRJNA630877_S_NODE_118093_length_193_cov_1.157895_g98956_i0 PRJNA630877 118093 193 1.157895 2.23473735 Terracidiphilus sp. 1964191 Bacteria Bacteria 43.5 0.01   NR HEY1903716.1 1964191 g98956 i0 48.8 0.637305699481865 41 21 63.7 0 125 3 138 178 HEY1903716.1 class I adenylate-forming enzyme family protein [Terracidiphilus sp.] diamond 123 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
31344917 31344917 PRJNA630877_S_NODE_72196_length_337_cov_2.469595_g53059_i0 PRJNA630877 72196 337 2.469595 8.32253515 Terriglobales bacterium 2282142 Bacteria Bacteria 44.7 0.00638   NR HJX00211.1 2282142 g53059 i0 37.5 0.640949554896142 72 44 63.2 1 60 272 15 86 HJX00211.1 hypothetical protein [Terriglobales bacterium] diamond 216 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
31471507 31471507 PRJNA630877_S_NODE_121596_length_188_cov_1.442177_g102459_i0 PRJNA630877 121596 188 1.442177 2.71129276 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 42.4 0.0223   NR HVN06238.1 2212468 g102459 i0 38.7 0.98936170212766 62 36 95.7 2 1 180 44 105 HVN06238.1 phage baseplate assembly protein V [Bryobacteraceae bacterium] diamond 186 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31503147 31503147 PRJNA630877_S_NODE_89436_length_257_cov_1.921296_g70299_i0 PRJNA630877 89436 257 1.921296 4.93773072 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 43.9 0.0162   NR HEX8764948.1 3069120 g70299 i0 32.8 1.55252918287938 64 41 72.4 1 25 210 106 169 HEX8764948.1 phosphate ABC transporter substrate-binding protein PstS [Candidatus Acidiferrum sp.] diamond 399 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
32103981 32103981 PRJNA630877_S_NODE_132558_length_175_cov_0.932836_g113421_i0 PRJNA630877 132558 175 0.932836 1.632463 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 43.5 0.00814   NR HYL76495.1 2212468 g113421 i0 43.8 0.822857142857143 48 26 82.3 1 7 150 247 293 HYL76495.1 alginate lyase family protein [Bryobacteraceae bacterium] diamond 144 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;