RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA630877", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA630877 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28956851 28956851 PRJNA630877_S_NODE_44548_length_669_cov_3.208599_g26850_i0 PRJNA630877 44548 669 3.208599 21.46552731 Fungi 4751 Fungi Fungi 57 1.72e-5   NR KNE56242.1 578462 g26850 i0 57.1 1.45291479820628 42 16 17.9 1 3 122 109 150 KNE56242.1 hypothetical protein AMAG_02075 [Allomyces macrogynus ATCC 38327] diamond 972 57 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
29228460 29228460 PRJNA630877_S_NODE_140469_length_166_cov_3.016000_g121332_i0 PRJNA630877 140469 166 3.016 5.00656 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 47.4 3.1e-4   NR KNE57521.1 578462 g121332 i0 65.5 2.0421686746988 29 10 52.4 0 166 80 120 148 KNE57521.1 hypothetical protein AMAG_03224 [Allomyces macrogynus ATCC 38327] diamond 339 47.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;