RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA630877", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA630877 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7529629 7529629 PRJNA630877_S_NODE_42066_length_720_cov_2.670103_g24879_i0 PRJNA630877 42066 720 2.670103 19.2247416 Fimbriimonas 1005038 Bacteria Bacteria 989 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g24879 i0 91.54 308.393055555556 721 55 99 6 1 718 29235 28518 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 222043 989 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
7529636 7529636 PRJNA630877_S_NODE_83046_length_281_cov_1.829167_g63909_i0 PRJNA630877 83046 281 1.829167 5.13995927 Fimbriimonas 1005038 Bacteria Bacteria 353 6.34e-93   NTclustered gi|663071213|gb|CP007139.1| 661478 g63909 i0 89.855 33.4839857651246 276 27 98 1 1 276 28469 28195 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 9409 353 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
15180154 15180154 PRJNA630877_S_NODE_95992_length_237_cov_2.571429_g76855_i0 PRJNA630877 95992 237 2.571429 6.09428673 Fimbriimonas 1005038 Bacteria Bacteria 298 2.47e-76   NTclustered gi|663071213|gb|CP007139.1| 661478 g76855 i0 89.451 93.0295358649789 237 24 100 1 1 237 27892 28127 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 22048 300 0.993333333333333 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
21553688 21553688 PRJNA630877_S_NODE_122497_length_187_cov_1.191781_g103360_i0 PRJNA630877 122497 187 1.191781 2.22863047 Fimbriimonas 1005038 Bacteria Bacteria 274 3.14e-69   NTclustered gi|663071213|gb|CP007139.1| 661478 g103360 i0 93.048 236.106951871658 187 13 100 0 1 187 27515 27329 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 44152 274 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;