contig_metadata
24 rows where bioproject = "PRJNA630877", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2427005 | 2427005 | PRJNA630877_S_NODE_88042_length_262_cov_1.429864_g68905_i0 | PRJNA630877 | 88042 | 262 | 1.429864 | 3.74624368 | Bremerella | 2714594 | Bacteria | Bacteria | 60.2 | 1.43e-4 | NTclustered | gi|1712647354|gb|CP036289.1| | 2527984 | g68905 | i0 | 97.143 | 0.267175572519084 | 35 | 1 | 13 | 0 | 172 | 206 | 2032779 | 2032745 | Bremerella volcania strain Pan97 chromosome, complete genome | blastn | 70 | 60.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella volcania | |
| 8256278 | 8256278 | PRJNA630877_S_NODE_64327_length_397_cov_2.176966_g45195_i0 | PRJNA630877 | 64327 | 397 | 2.176966 | 8.64255502 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 381 | 4.269999999999999e-101 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g45195 | i0 | 91.429 | 85.3098236775819 | 280 | 20 | 70 | 4 | 1 | 277 | 2002730 | 2003008 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 33868 | 381 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 10080216 | 10080216 | PRJNA630877_S_NODE_67948_length_367_cov_2.230061_g48811_i0 | PRJNA630877 | 67948 | 367 | 2.230061 | 8.18432387 | Limnoglobus | 2731450 | Bacteria | Bacteria | 446 | 1.3699999999999999e-120 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g48811 | i0 | 89.167 | 186.264305177112 | 360 | 36 | 98 | 3 | 1 | 358 | 2002291 | 2002649 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 68359 | 446 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 10807301 | 10807301 | PRJNA630877_S_NODE_142649_length_164_cov_2.861789_g123512_i0 | PRJNA630877 | 142649 | 164 | 2.861789 | 4.69333396 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 248 | 1.63e-61 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g123512 | i0 | 93.902 | 164.69512195122 | 164 | 10 | 100 | 0 | 1 | 164 | 2019281 | 2019118 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 27010 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 13905674 | 13905674 | PRJNA630877_S_NODE_107291_length_211_cov_2.505882_g88154_i0 | PRJNA630877 | 107291 | 211 | 2.505882 | 5.28741102 | Limnoglobus | 2731450 | Bacteria | Bacteria | 313 | 7.7e-81 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g88154 | i0 | 93.365 | 211.047393364929 | 211 | 14 | 100 | 0 | 1 | 211 | 3456689 | 3456479 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 44531 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 17729609 | 17729609 | PRJNA630877_S_NODE_141854_length_165_cov_1.774194_g122717_i0 | PRJNA630877 | 141854 | 165 | 1.774194 | 2.9274201 | Gemmataceae | 1914233 | Bacteria | Bacteria | 263 | 5.86e-66 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g122717 | i0 | 97.403 | 113.866666666667 | 154 | 4 | 93 | 0 | 1 | 154 | 1837 | 1990 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 18788 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 21005527 | 21005527 | PRJNA630877_S_NODE_84237_length_276_cov_1.680851_g65100_i0 | PRJNA630877 | 84237 | 276 | 1.680851 | 4.63914876 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 342 | 1.3399999999999999e-89 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g65100 | i0 | 88.968 | 60.5978260869565 | 281 | 26 | 100 | 3 | 1 | 276 | 2020028 | 2020308 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 16725 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 21553691 | 21553691 | PRJNA630877_S_NODE_140857_length_166_cov_1.680000_g121720_i0 | PRJNA630877 | 140857 | 166 | 1.68 | 2.7888 | Gemmata | 113 | Bacteria | Bacteria | 305 | 9.67e-79 | NTclustered | gi|307591227|gb|GQ889438.1| | 886811 | g121720 | i0 | 100 | 98.3975903614458 | 165 | 0 | 99 | 0 | 2 | 166 | 583 | 747 | Gemmata sp. Io3-3 16S ribosomal RNA gene, partial sequence | blastn | 16334 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. Io3-3 | |
| 22280230 | 22280230 | PRJNA630877_S_NODE_148558_length_159_cov_1.864407_g129421_i0 | PRJNA630877 | 148558 | 159 | 1.864407 | 2.96440713 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 122 | 9.889999999999999e-24 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g129421 | i0 | 80.864 | 51.3207547169811 | 162 | 25 | 100 | 6 | 1 | 159 | 320222 | 320380 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 8160 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 22829183 | 22829183 | PRJNA630877_S_NODE_124398_length_184_cov_1.846154_g105261_i0 | PRJNA630877 | 124398 | 184 | 1.846154 | 3.39692336 | Limnoglobus | 2731450 | Bacteria | Bacteria | 207 | 3.16e-49 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g105261 | i0 | 87.097 | 139.652173913043 | 186 | 20 | 100 | 3 | 1 | 184 | 2002300 | 2002117 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 25696 | 207 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 26891274 | 26891274 | PRJNA630877_S_NODE_122841_length_186_cov_2.027586_g103704_i0 | PRJNA630877 | 122841 | 186 | 2.027586 | 3.77130996 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.4 | 0.025 | NR | MEM7164993.1 | 2026780 | g103704 | i0 | 45.7 | 0.741935483870968 | 46 | 23 | 71 | 1 | 28 | 159 | 52 | 97 | MEM7164993.1 hypothetical protein [Planctomycetota bacterium] | diamond | 138 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 26954109 | 26954109 | PRJNA630877_S_NODE_126162_length_182_cov_1.510638_g107025_i0 | PRJNA630877 | 126162 | 182 | 1.510638 | 2.74936116 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 42.7 | 0.0163 | NR | MEI7702286.1 | 2052181 | g107025 | i0 | 48.8 | 0.675824175824176 | 41 | 20 | 65.9 | 1 | 128 | 9 | 54 | 94 | MEI7702286.1 TerC family protein [Planctomycetia bacterium] | diamond | 123 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 27017552 | 27017552 | PRJNA630877_S_NODE_85142_length_272_cov_2.393939_g66005_i0 | PRJNA630877 | 85142 | 272 | 2.393939 | 6.51151408 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.7 | 0.0111 | NR | HUW32127.1 | 2026780 | g66005 | i0 | 37.9 | 0.727941176470588 | 66 | 35 | 68.4 | 2 | 33 | 218 | 6 | 69 | HUW32127.1 hypothetical protein [Planctomycetota bacterium] | diamond | 198 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28154903 | 28154903 | PRJNA630877_S_NODE_120845_length_189_cov_1.358108_g101708_i0 | PRJNA630877 | 120845 | 189 | 1.358108 | 2.56682412 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.2 | 0.0263 | NR | MFC1766865.1 | 2026780 | g101708 | i0 | 34.8 | 0.73015873015873 | 46 | 28 | 73 | 1 | 23 | 160 | 46 | 89 | MFC1766865.1 tyrosine-type recombinase/integrase [Planctomycetota bacterium] | diamond | 138 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28407352 | 28407352 | PRJNA630877_S_NODE_101566_length_223_cov_2.950549_g82429_i0 | PRJNA630877 | 101566 | 223 | 2.950549 | 6.57972427 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 42.4 | 0.0371 | NR | MFB3890659.1 | 2026778 | g82429 | i0 | 40.6 | 0.860986547085202 | 64 | 29 | 80.7 | 2 | 209 | 30 | 222 | 280 | MFB3890659.1 uroporphyrinogen decarboxylase family protein [Phycisphaerae bacterium] | diamond | 192 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 29165320 | 29165320 | PRJNA630877_S_NODE_122289_length_187_cov_1.506849_g103152_i0 | PRJNA630877 | 122289 | 187 | 1.506849 | 2.81780763 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 41.6 | 0.0456 | NR | HEV2293353.1 | 2876886 | g103152 | i0 | 39.3 | 0.898395721925134 | 56 | 34 | 89.8 | 0 | 4 | 171 | 171 | 226 | HEV2293353.1 integron integrase [Tepidisphaeraceae bacterium] | diamond | 168 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 29430021 | 29430021 | PRJNA630877_S_NODE_107129_length_212_cov_1.216374_g87992_i0 | PRJNA630877 | 107129 | 212 | 1.216374 | 2.57871288 | Planctomycetia | 203683 | Bacteria | Bacteria | 42.7 | 0.024 | NR | HEV8067191.1 | 2026779 | g87992 | i0 | 33.9 | 2.34905660377358 | 59 | 39 | 83.5 | 0 | 191 | 15 | 5 | 63 | HEV8067191.1 ABC transporter ATP-binding protein [Planctomycetaceae bacterium] | diamond | 498 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29575318 | 29575318 | PRJNA630877_S_NODE_92370_length_248_cov_1.376812_g73233_i0 | PRJNA630877 | 92370 | 248 | 1.376812 | 3.41449376 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 42.7 | 0.0367 | NR | MEZ6091620.1 | 2699754 | g73233 | i0 | 35.2 | 0.653225806451613 | 54 | 28 | 58.1 | 2 | 14 | 157 | 175 | 227 | MEZ6091620.1 hypothetical protein [Pirellulaceae bacterium] | diamond | 162 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 30554636 | 30554636 | PRJNA630877_S_NODE_91133_length_252_cov_0.952607_g71996_i0 | PRJNA630877 | 91133 | 252 | 0.952607 | 2.40056964 | Phycisphaerae bacterium SM23_33 | 1703412 | Bacteria | Bacteria | 45.8 | 0.00329 | NR | KPK84483.1 | 1703412 | g71996 | i0 | 32.1 | 0.964285714285714 | 81 | 37 | 75 | 3 | 224 | 36 | 303 | 383 | KPK84483.1 MAG: hypothetical protein AMJ81_05380 [Phycisphaerae bacterium SM23_33] | diamond | 243 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium SM23_33 | ||||
| 30680953 | 30680953 | PRJNA630877_S_NODE_95453_length_239_cov_1.333333_g76316_i0 | PRJNA630877 | 95453 | 239 | 1.333333 | 3.18666587 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 46.6 | 0.00152 | NR | MEO1715707.1 | 2026780 | g76316 | i0 | 34.7 | 0.903765690376569 | 72 | 46 | 89.1 | 1 | 6 | 218 | 288 | 359 | MEO1715707.1 hypothetical protein [Planctomycetota bacterium] | diamond | 216 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31028927 | 31028927 | PRJNA630877_S_NODE_70515_length_348_cov_2.778502_g51378_i0 | PRJNA630877 | 70515 | 348 | 2.778502 | 9.66918696 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 46.2 | 0.00678 | NR | MCB9832231.1 | 2026780 | g51378 | i0 | 50.8 | 0.560344827586207 | 65 | 21 | 56 | 3 | 292 | 98 | 116 | 169 | MCB9832231.1 hypothetical protein [Planctomycetota bacterium] | diamond | 195 | 46.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32040769 | 32040769 | PRJNA630877_S_NODE_49378_length_581_cov_2.151852_g30881_i0 | PRJNA630877 | 49378 | 581 | 2.151852 | 12.50226012 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 47 | 0.0199 | NR | MEY4176768.1 | 2026780 | g30881 | i0 | 40 | 0.309810671256454 | 60 | 30 | 31 | 2 | 356 | 177 | 174 | 227 | MEY4176768.1 hypothetical protein [Planctomycetota bacterium] | diamond | 180 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32452341 | 32452341 | PRJNA630877_S_NODE_62819_length_410_cov_3.837398_g43688_i0 | PRJNA630877 | 62819 | 410 | 3.837398 | 15.7333318 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 45.8 | 0.00837 | NR | MEZ6137792.1 | 2699754 | g43688 | i0 | 34.3 | 0.51219512195122 | 70 | 41 | 51.2 | 1 | 395 | 186 | 34 | 98 | MEZ6137792.1 DinB family protein [Pirellulaceae bacterium] | diamond | 210 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 32798777 | 32798777 | PRJNA630877_S_NODE_126220_length_182_cov_1.269504_g107083_i0 | PRJNA630877 | 126220 | 182 | 1.269504 | 2.31049728 | Neorhodopirellula pilleata | 2714738 | Bacteria | Bacteria | 41.6 | 0.0421 | NR | WP_231602722.1 | 2714738 | g107083 | i0 | 43.8 | 0.527472527472527 | 32 | 18 | 52.7 | 0 | 144 | 49 | 235 | 266 | WP_231602722.1 sigma-54 interaction domain-containing protein [Neorhodopirellula pilleata] | diamond | 96 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Neorhodopirellula | Neorhodopirellula pilleata |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;