RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA630877", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 5 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 5 ✖

bioproject 1

  • PRJNA630877 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5706733 5706733 PRJNA630877_S_NODE_94005_length_243_cov_1.504950_g74868_i0 PRJNA630877 94005 243 1.50495 3.6570285 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|2318756158|ref|XM_051213848.1| 6185 g74868 i0 100 0.11522633744856 28 0 12 0 190 217 69 96 Schistosoma haematobium uncharacterized protein (MS3_00005763), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
29430022 29430022 PRJNA630877_S_NODE_122649_length_186_cov_6.875862_g103512_i0 PRJNA630877 122649 186 6.875862 12.78910332 Metazoa 33208 Platyhelminthes Platyhelminthes 127 3.729999999999999e-32   NR TNN08368.1 6182 g103512 i0 96.7 1087.08064516129 61 2 98.4 0 2 184 812 872 TNN08368.1 Cytoplasmic polyadenylation element-binding protein [Schistosoma japonicum] diamond 202197 128 0.9921875 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30206970 30206970 PRJNA630877_S_NODE_70692_length_347_cov_2.127451_g51555_i0 PRJNA630877 70692 347 2.127451 7.38225497 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 43.9 0.0321   NR AAK67486.1 6182 g51555 i0 83.3 0.207492795389049 24 4 20.7 0 273 344 5 28 AAK67486.1 Cs2 protein [Schistosoma japonicum] diamond 72 43.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30428781 30428781 PRJNA630877_S_NODE_120793_length_189_cov_1.479730_g101656_i0 PRJNA630877 120793 189 1.47973 2.7966897 Trichobilharzia regenti 157069 Platyhelminthes Platyhelminthes 40.8 0.0133   NR VDQ09830.1 157069 g101656 i0 53.1 0.507936507936508 32 15 50.8 0 54 149 35 66 VDQ09830.1 unnamed protein product [Trichobilharzia regenti] diamond 96 40.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
32483834 32483834 PRJNA630877_S_NODE_159699_length_150_cov_2.018349_g140562_i0 PRJNA630877 159699 150 2.018349 3.0275235 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 103 5.22e-24   NR KAL3316100.1 1844966 g140562 i0 95.9 61.74 49 2 98 0 2 148 1270 1318 KAL3316100.1 Dynein heavy chain 9, axonemal [Cichlidogyrus casuarinus] diamond 9261 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;