RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA630877", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Staskawicziibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Staskawicziibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA630877 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26985842 26985842 PRJNA630877_S_NODE_134702_length_172_cov_1.725191_g115565_i0 PRJNA630877 134702 172 1.725191 2.96732852 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 42.4 0.0202   NR MBM3206904.1 2053617 g115565 i0 56.7 0.523255813953488 30 13 52.3 0 2 91 657 686 MBM3206904.1 reverse transcriptase family protein [Candidatus Staskawiczbacteria bacterium] diamond 90 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
29039023 29039023 PRJNA630877_S_NODE_140208_length_167_cov_1.047619_g121071_i0 PRJNA630877 140208 167 1.047619 1.74952373 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 42.7 0.0135   NR MBM3206904.1 2053617 g121071 i0 45.7 1.65269461077844 46 25 82.6 0 140 3 546 591 MBM3206904.1 reverse transcriptase family protein [Candidatus Staskawiczbacteria bacterium] diamond 276 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
30017773 30017773 PRJNA630877_S_NODE_11111_length_2081_cov_3.575980_g6049_i0 PRJNA630877 11111 2081 3.57598 74.4161438 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 452 2.26e-146   NR MBM3206904.1 2053617 g6049 i0 45.9 2.03123498318116 481 258 69.1 2 2052 616 205 685 MBM3206904.1 reverse transcriptase family protein [Candidatus Staskawiczbacteria bacterium] diamond 4227 452 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
32452343 32452343 PRJNA630877_S_NODE_85699_length_270_cov_2.126638_g66562_i0 PRJNA630877 85699 270 2.126638 5.7419226 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 92 2.34e-19   NR MBM3206904.1 2053617 g66562 i0 48.2 0.944444444444444 85 44 94.4 0 257 3 401 485 MBM3206904.1 reverse transcriptase family protein [Candidatus Staskawiczbacteria bacterium] diamond 255 92 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;