contig_metadata
20 rows where bioproject = "PRJNA630162" and tax_phylum = "Synergistota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 602278 | 602278 | PRJNA630162_P_NODE_42701_length_271_cov_3.842342_g41178_i0 | PRJNA630162 | 42701 | 271 | 3.842342 | 10.41274682 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 486 | 5.7499999999999985e-133 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g41178 | i0 | 99.624 | 93.1033210332103 | 266 | 1 | 98 | 0 | 6 | 271 | 1172542 | 1172807 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 25231 | 486 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 1877602 | 1877602 | PRJNA630162_P_NODE_115962_length_176_cov_2.787402_g114439_i0 | PRJNA630162 | 115962 | 176 | 2.787402 | 4.90582752 | Pyramidobacter sp. YE332 | 3068894 | Bacteria | Bacteria | 287 | 3.74e-73 | NTclustered | gi|2601021520|gb|CP133038.1| | 3068894 | g114439 | i0 | 97.059 | 1.92613636363636 | 170 | 5 | 97 | 0 | 3 | 172 | 2677843 | 2678012 | Pyramidobacter sp. YE332 chromosome, complete genome | blastn | 339 | 287 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Pyramidobacter | Pyramidobacter sp. YE332 | ||
| 5706320 | 5706320 | PRJNA630162_P_NODE_80705_length_200_cov_3.192053_g79182_i0 | PRJNA630162 | 80705 | 200 | 3.192053 | 6.384106 | uncultured Dethiosulfovibrio sp. | 185448 | Bacteria | Bacteria | 171 | 4.599999999999999e-38 | NTclustered | gi|2621705290|emb|OY763420.1| | 185448 | g79182 | i0 | 86.061 | 467.24 | 165 | 15 | 81 | 6 | 4 | 165 | 764033 | 763874 | MAG: uncultured Dethiosulfovibrio sp. isolate 94f88398-021e-4021-9552-bf231e535e7d genome assembly, chromosome: 1 | blastn | 93448 | 171 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Dethiosulfovibrio | uncultured Dethiosulfovibrio sp. | ||
| 6255359 | 6255359 | PRJNA630162_P_NODE_93245_length_190_cov_1.134752_g91722_i0 | PRJNA630162 | 93245 | 190 | 1.134752 | 2.1560288 | Pyramidobacter | 638847 | Bacteria | Bacteria | 224 | 3.2699999999999995e-54 | NTclustered | gi|167996909|gb|EU379932.1| | 352165 | g91722 | i0 | 88.649 | 7.78947368421053 | 185 | 19 | 97 | 2 | 6 | 189 | 2471 | 2654 | Synergistes sp. W5455 16S ribosomal RNA gene, 16S-23S ribosomal RNA intergenic spacer, 23S ribosomal RNA gene, 23S-5S ribosomal RNA intergenic spacer, and 5S ribosomal RNA gene, complete sequence | blastn | 1480 | 224 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Pyramidobacter | Pyramidobacter piscolens | ||
| 8254692 | 8254692 | PRJNA630162_P_NODE_126547_length_171_cov_1.614754_g125024_i0 | PRJNA630162 | 126547 | 171 | 1.614754 | 2.76122934 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 252 | 1.32e-62 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g125024 | i0 | 94.012 | 4.75438596491228 | 167 | 9 | 97 | 1 | 1 | 166 | 69426 | 69592 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 813 | 252 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 10805524 | 10805524 | PRJNA630162_P_NODE_103829_length_183_cov_2.044776_g102306_i0 | PRJNA630162 | 103829 | 183 | 2.044776 | 3.74194008 | Jonquetella anthropi | 428712 | Bacteria | Bacteria | 167 | 5.33e-37 | NTclustered | gi|194410714|gb|EU840722.1| | 428712 | g102306 | i0 | 93.694 | 78.2131147540984 | 111 | 7 | 61 | 0 | 7 | 117 | 1557 | 1667 | Jonquetella anthropi strain E3_33 23S ribosomal RNA gene, partial sequence | blastn | 14313 | 167 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Jonquetella | Jonquetella anthropi | ||
| 10806398 | 10806398 | PRJNA630162_P_NODE_32969_length_313_cov_2.969697_g31447_i0 | PRJNA630162 | 32969 | 313 | 2.969697 | 9.29515161 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 455 | 1.9100000000000003e-123 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g31447 | i0 | 93.791 | 93.2555910543131 | 306 | 13 | 97 | 6 | 9 | 312 | 68903 | 68602 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 29189 | 455 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 12080755 | 12080755 | PRJNA630162_P_NODE_102610_length_184_cov_1.496296_g101087_i0 | PRJNA630162 | 102610 | 184 | 1.496296 | 2.75318464 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 217 | 5.26e-52 | NTclustered | gi|2626233883|emb|OY821326.1| | 2053624 | g101087 | i0 | 89.595 | 405.820652173913 | 173 | 15 | 97 | 3 | 1 | 172 | 325788 | 325958 | MAG: Synergistaceae bacterium isolate a20e232d-ae79-494a-a7eb-231c2e3632a3 genome assembly, chromosome: 1 | blastn | 74671 | 217 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 12081893 | 12081893 | PRJNA630162_P_NODE_60750_length_226_cov_4.412429_g59227_i0 | PRJNA630162 | 60750 | 226 | 4.412429 | 9.97208954 | Synergistales bacterium | 2268201 | Bacteria | Bacteria | 231 | 2.4099999999999996e-56 | NTclustered | gi|2621703689|emb|OY762654.1| | 2268201 | g59227 | i0 | 85.903 | 329.16814159292 | 227 | 21 | 98 | 10 | 1 | 222 | 236766 | 236986 | MAG: Synergistales bacterium isolate e2a2af2a-30b9-47e3-8e03-f1be080e1666 genome assembly, chromosome: 1 | blastn | 74392 | 231 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistales bacterium | ||||
| 12082043 | 12082043 | PRJNA630162_P_NODE_74890_length_208_cov_1.264151_g73367_i0 | PRJNA630162 | 74890 | 208 | 1.264151 | 2.62943408 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 99 | 2.31e-16 | NTclustered | gi|2626233883|emb|OY821326.1| | 2053624 | g73367 | i0 | 83.962 | 60.4615384615385 | 106 | 13 | 50 | 4 | 99 | 203 | 324944 | 325046 | MAG: Synergistaceae bacterium isolate a20e232d-ae79-494a-a7eb-231c2e3632a3 genome assembly, chromosome: 1 | blastn | 12576 | 99 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 15904884 | 15904884 | PRJNA630162_P_NODE_17453_length_447_cov_3.605528_g15949_i0 | PRJNA630162 | 17453 | 447 | 3.605528 | 16.11671016 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g15949 | i0 | 93.379 | 120.440715883669 | 438 | 27 | 98 | 2 | 2 | 438 | 69429 | 69865 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 53837 | 647 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 15904901 | 15904901 | PRJNA630162_P_NODE_18373_length_434_cov_3.337662_g16863_i0 | PRJNA630162 | 18373 | 434 | 3.337662 | 14.48545308 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 427 | 5.9599999999999985e-115 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g16863 | i0 | 87.206 | 30.3433179723502 | 383 | 39 | 87 | 9 | 7 | 384 | 68741 | 68364 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 13169 | 427 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 15905401 | 15905401 | PRJNA630162_P_NODE_65333_length_219_cov_1.111765_g63810_i0 | PRJNA630162 | 65333 | 219 | 1.111765 | 2.43476535 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 311 | 2.9000000000000004e-80 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g63810 | i0 | 93.333 | 218.744292237443 | 210 | 14 | 96 | 0 | 6 | 215 | 67498 | 67289 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 47905 | 311 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 15905665 | 15905665 | PRJNA630162_P_NODE_93993_length_189_cov_1.964286_g92470_i0 | PRJNA630162 | 93993 | 189 | 1.964286 | 3.71250054 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 141 | 3.3600000000000003e-29 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g92470 | i0 | 80.749 | 22.015873015873 | 187 | 31 | 98 | 5 | 1 | 185 | 68549 | 68732 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 4161 | 141 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 18453530 | 18453530 | PRJNA630162_P_NODE_12415_length_540_cov_16.541752_g10948_i0 | PRJNA630162 | 12415 | 540 | 16.541752 | 89.3254608 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 802 | 0 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g10948 | i0 | 93.68 | 321.807407407407 | 538 | 30 | 99 | 4 | 1 | 536 | 68965 | 69500 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 173776 | 802 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 18453701 | 18453701 | PRJNA630162_P_NODE_142555_length_166_cov_1.572650_g141032_i0 | PRJNA630162 | 142555 | 166 | 1.57265 | 2.610599 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 165 | 1.7100000000000002e-36 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g141032 | i0 | 85.185 | 96.3192771084337 | 162 | 22 | 96 | 2 | 6 | 165 | 67393 | 67232 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 15989 | 165 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 18453916 | 18453916 | PRJNA630162_P_NODE_164655_length_159_cov_3.327273_g163132_i0 | PRJNA630162 | 164655 | 159 | 3.327273 | 5.29036407 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 150 | 4.54e-32 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g163132 | i0 | 89.744 | 103.339622641509 | 117 | 12 | 74 | 0 | 43 | 159 | 69880 | 69996 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 16431 | 150 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 23554170 | 23554170 | PRJNA630162_P_NODE_130739_length_169_cov_1.583333_g129216_i0 | PRJNA630162 | 130739 | 169 | 1.583333 | 2.67583277 | Jonquetella anthropi | 428712 | Bacteria | Bacteria | 119 | 1.37e-22 | NTclustered | gi|194410714|gb|EU840722.1| | 428712 | g129216 | i0 | 90.11 | 121.467455621302 | 91 | 9 | 54 | 0 | 71 | 161 | 258 | 168 | Jonquetella anthropi strain E3_33 23S ribosomal RNA gene, partial sequence | blastn | 20528 | 119 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Jonquetella | Jonquetella anthropi | ||
| 27093381 | 27093381 | PRJNA630162_P_NODE_160342_length_162_cov_0.920354_g158819_i0 | PRJNA630162 | 160342 | 162 | 0.920354 | 1.49097348 | FCB group | 1783270 | Bacteria | Bacteria | 63.2 | 2.07e-11 | NR | MFA7219315.1 | 2053624 | g158819 | i0 | 56.6 | 1.94444444444444 | 53 | 21 | 94.4 | 1 | 155 | 3 | 12 | 64 | MFA7219315.1 hypothetical protein [Synergistaceae bacterium] | diamond | 315 | 63.5 | 0.995275590551181 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 32546983 | 32546983 | PRJNA630162_P_NODE_107639_length_181_cov_1.500000_g106116_i0 | PRJNA630162 | 107639 | 181 | 1.5 | 2.715 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 51.6 | 1.19e-5 | NR | MBR1602881.1 | 2053624 | g106116 | i0 | 45.8 | 3.23204419889503 | 59 | 32 | 97.8 | 0 | 179 | 3 | 2545 | 2603 | MBR1602881.1 hypothetical protein [Synergistaceae bacterium] | diamond | 585 | 51.6 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;