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contig_metadata

4 rows where bioproject = "PRJNA630162" and tax_phylum = "Sanchytriomycota"

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tax_superkingdom 1

tax_phylum 1

  • Sanchytriomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877848 1877848 PRJNA630162_P_NODE_143122_length_166_cov_1.290598_g141599_i0 PRJNA630162 143122 166 1.290598 2.14239268 Sanchytrium tribonematis 2020955 Fungi Fungi 278 2.11e-70   NTclustered gi|1216631260|gb|KY652376.1| 2020955 g141599 i0 98.113 9.2289156626506 159 3 96 0 1 159 5046 4888 Sanchytrium tribonematis isolate X-127 haplotype L 28S ribosomal RNA gene, partial sequence blastn 1532 278 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
13356786 13356786 PRJNA630162_P_NODE_72051_length_211_cov_4.345679_g70528_i0 PRJNA630162 72051 211 4.345679 9.16938269 Amoeboradix gromovi 2109901 Fungi Fungi 357 3.5099999999999996e-94   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g70528 i0 97.156 100.39336492891 211 6 100 0 1 211 1640 1850 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21183 357 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
22279257 22279257 PRJNA630162_P_NODE_27298_length_348_cov_3.692308_g25776_i0 PRJNA630162 27298 348 3.692308 12.84923184 Amoeboradix gromovi 2109901 Fungi Fungi 527 4.489999999999998e-145   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g25776 i0 94.477 71.9798850574713 344 15 98 4 1 342 1155 814 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25049 527 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
24828871 24828871 PRJNA630162_P_NODE_73860_length_209_cov_2.268750_g72337_i0 PRJNA630162 73860 209 2.26875 4.7416875 Amoeboradix gromovi 2109901 Fungi Fungi 322 1.26e-83   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g72337 i0 95.098 6.83253588516746 204 10 98 0 5 208 4101 4304 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1428 322 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;