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contig_metadata

18 rows where bioproject = "PRJNA630162" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601895 601895 PRJNA630162_P_NODE_164281_length_160_cov_2.099099_g162758_i0 PRJNA630162 164281 160 2.099099 3.3585584 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 215 1.6e-51   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g162758 i0 92.667 387.225 150 9 93 2 1 149 3831355 3831207 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 61956 215 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206
1151303 1151303 PRJNA630162_P_NODE_165921_length_158_cov_2.651376_g164398_i0 PRJNA630162 165921 158 2.651376 4.18917408 Rubrivirga 1434037 Bacteria Bacteria 259 7.17e-65   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g164398 i0 97.368 210.537974683544 152 4 96 0 6 157 807320 807471 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 33265 259 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
1151596 1151596 PRJNA630162_P_NODE_72081_length_211_cov_3.641975_g70558_i0 PRJNA630162 72081 211 3.641975 7.68456725 Rhodothermales 1853224 Bacteria Bacteria 224 3.709999999999999e-54   NTclustered gi|1167574847|gb|CP020382.1| 1779382 g70558 i0 88.77 200.995260663507 187 16 87 4 29 211 2906509 2906324 Rhodothermaceae bacterium RA chromosome, complete genome blastn 42410 224 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium RA
1878602 1878602 PRJNA630162_P_NODE_56562_length_234_cov_3.513514_g55039_i0 PRJNA630162 56562 234 3.513514 8.22162276 Rubrivirga sp. IMCC43871 3391575 Bacteria Bacteria 313 8.71e-81   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g55039 i0 91.342 406.478632478633 231 16 98 4 1 229 806697 806469 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 95116 313 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
3152848 3152848 PRJNA630162_P_NODE_165243_length_159_cov_2.209091_g163720_i0 PRJNA630162 165243 159 2.209091 3.51245469 Rubrivirga sp. IMCC43871 3391575 Bacteria Bacteria 202 1.2399999999999998e-47   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g163720 i0 93.478 153.037735849057 138 5 86 4 4 139 805648 805513 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 24333 202 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
8804290 8804290 PRJNA630162_P_NODE_22587_length_386_cov_3.089021_g21069_i0 PRJNA630162 22587 386 3.089021 11.92362106 Rhodothermus 29548 Bacteria Bacteria 322 2.54e-83   NTclustered gi|2844596544|gb|CP172416.1| 29549 g21069 i0 84.058 189.455958549223 345 44 87 9 28 364 3095609 3095268 Rhodothermus marinus strain ISCAR-493 chromosome blastn 73130 322 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodothermus Rhodothermus marinus
9529978 9529978 PRJNA630162_P_NODE_120348_length_174_cov_1.840000_g118825_i0 PRJNA630162 120348 174 1.84 3.2016 Rhodothermales bacterium 2306054 Bacteria Bacteria 52.8 0.015   NTclustered gi|2893358427|emb|OZ220719.1| 2306054 g118825 i0 100 0.160919540229885 28 0 16 0 121 148 39773 39746 MAG: Rhodothermales bacterium isolate dfa80fe1-3418-4a7a-9107-99a60459722b genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
10806016 10806016 PRJNA630162_P_NODE_155389_length_163_cov_1.429825_g153866_i0 PRJNA630162 155389 163 1.429825 2.33061475 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 265 1.6e-66   NTclustered gi|2874254104|emb|OY970187.1| 2838334 g153866 i0 96.855 218.147239263804 159 4 97 1 1 158 1308512 1308670 MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 blastn 35558 265 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
11354527 11354527 PRJNA630162_P_NODE_118989_length_175_cov_1.388889_g117466_i0 PRJNA630162 118989 175 1.388889 2.43055575 Rhodothermales 1853224 Bacteria Bacteria 178 2.3299999999999993e-40   NTclustered gi|1167574847|gb|CP020382.1| 1779382 g117466 i0 86.585 169.634285714286 164 18 92 3 8 168 2906827 2906665 Rhodothermaceae bacterium RA chromosome, complete genome blastn 29686 178 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium RA
16454134 16454134 PRJNA630162_P_NODE_26213_length_356_cov_4.013029_g24692_i0 PRJNA630162 26213 356 4.013029 14.28638324 Rubrivirga 1434037 Bacteria Bacteria 436 7.96e-118   NTclustered gi|2874254104|emb|OY970187.1| 2838334 g24692 i0 89.205 144.491573033708 352 34 98 4 7 356 1307907 1307558 MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 blastn 51439 436 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
18454396 18454396 PRJNA630162_P_NODE_48595_length_253_cov_1.872549_g47072_i0 PRJNA630162 48595 253 1.872549 4.73754897 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 279 9.67e-71   NTclustered gi|2874254104|emb|OY970187.1| 2838334 g47072 i0 87.603 485.162055335968 242 29 96 1 12 253 1309431 1309191 MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 blastn 122746 279 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
21553353 21553353 PRJNA630162_P_NODE_34357_length_306_cov_1.322957_g32834_i0 PRJNA630162 34357 306 1.322957 4.04824842 Rubrivirga 1434037 Bacteria Bacteria 398 3.1799999999999993e-106   NTclustered gi|2874254104|emb|OY970187.1| 2838334 g32834 i0 90.492 248.437908496732 305 23 98 3 4 303 1308315 1308012 MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 blastn 76022 398 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
21553468 21553468 PRJNA630162_P_NODE_59057_length_229_cov_4.244444_g57534_i0 PRJNA630162 59057 229 4.244444 9.71977676 Rubrivirga 1434037 Bacteria Bacteria 278 3.1e-70   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g57534 i0 88.889 399.218340611354 225 25 98 0 1 225 808182 807958 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 91421 278 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
23553927 23553927 PRJNA630162_P_NODE_104419_length_183_cov_1.402985_g102896_i0 PRJNA630162 104419 183 1.402985 2.56746255 Rhodothermales bacterium 2306054 Bacteria Bacteria 143 8.989999999999998e-30   NTclustered gi|2893358387|emb|OZ220707.1| 2306054 g102896 i0 88.333 143.72131147541 120 12 65 2 29 147 1911702 1911820 MAG: Rhodothermales bacterium isolate 73463979-71cf-475a-bf3e-fc0c682d52d1 genome assembly, chromosome: 1 blastn 26301 143 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
27270387 27270387 PRJNA630162_P_NODE_65303_length_219_cov_1.182353_g63780_i0 PRJNA630162 65303 219 1.182353 2.58935307 Rhodothermales bacterium 2306054 Bacteria Bacteria 85.9 1.47e-17   NR NNE46316.1 2306054 g63780 i0 79.5 0.602739726027397 44 9 60.3 0 218 87 351 394 NNE46316.1 hypothetical protein [Rhodothermales bacterium] diamond 132 85.9 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
27460086 27460086 PRJNA630162_P_NODE_161823_length_162_cov_0.920354_g160300_i0 PRJNA630162 161823 162 0.920354 1.49097348 Rhodothermales bacterium 2306054 Bacteria Bacteria 48.9 8.16e-5   NR HYE59421.1 2306054 g160300 i0 51.9 0.962962962962963 52 25 96.3 0 6 161 753 804 HYE59421.1 hypothetical protein [Rhodothermales bacterium] diamond 156 48.9 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28817223 28817223 PRJNA630162_P_NODE_103488_length_183_cov_2.873134_g101965_i0 PRJNA630162 103488 183 2.873134 5.25783522 Rhodothermaceae bacterium 2026787 Bacteria Bacteria 71.6 1.11e-12   NR MAQ95730.1 2026787 g101965 i0 57.9 0.934426229508197 57 24 93.4 0 1 171 425 481 MAQ95730.1 hypothetical protein [Rhodothermaceae bacterium] diamond 171 71.6 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium
31882283 31882283 PRJNA630162_P_NODE_169417_length_155_cov_2.283019_g167894_i0 PRJNA630162 169417 155 2.283019 3.53867945 Rhodothermales bacterium 2306054 Bacteria Bacteria 75.1 4.33e-14   NR HLA64784.1 2306054 g167894 i0 66 3.87096774193548 50 17 96.8 0 4 153 109 158 HLA64784.1 PAS domain S-box protein [Rhodothermales bacterium] diamond 600 75.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;