RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA630162" and tax_phylum = "Nemertea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nemertea · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877985 1877985 PRJNA630162_P_NODE_157402_length_163_cov_0.912281_g155879_i0 PRJNA630162 157402 163 0.912281 1.48701803 Nemertopsis bivittata 188185 Nemertea other_Eukaryota 180 5.97e-41   NTclustered gi|342210282|gb|JF277701.1| 188185 g155879 i0 86.585 97.1288343558282 164 20 99 2 1 162 268 105 Nemertopsis bivittata voucher MCZ DNA106135 histone H3 gene, partial cds blastn 15832 180 1 Eukaryota Opisthokonta Metazoa Nemertea Enopla Monostilifera Emplectonematidae Nemertopsis Nemertopsis bivittata
1878466 1878466 PRJNA630162_P_NODE_45362_length_262_cov_11.892019_g43839_i0 PRJNA630162 45362 262 11.892019 31.15708978 Tubulanus sp. MCZ IZ 45559 1684130 Nemertea other_Eukaryota 97.1 1.09e-15   NTclustered gi|906449913|gb|KP270823.1| 1684130 g43839 i0 81.102 32.8435114503817 127 18 47 4 7 130 2936 3059 Tubulanus sp. MCZ IZ 45559 28S ribosomal RNA gene, partial sequence blastn 8605 97.1 1 Eukaryota Opisthokonta Metazoa Nemertea Palaeonemertea Tubulaniformes Tubulanidae Tubulanus Tubulanus sp. MCZ IZ 45559
4979370 4979370 PRJNA630162_P_NODE_127404_length_170_cov_5.272727_g125881_i0 PRJNA630162 127404 170 5.272727 8.9636359 Metazoa 33208 Nemertea other_Eukaryota 82.4 1.81e-11   NTclustered gi|2724538099|ref|XR_010449245.1| 88925 g125881 i0 100 25.5058823529412 44 0 26 0 122 165 44 1 PREDICTED: Lineus longissimus small nucleolar RNA U3 (LOC135499125), ncRNA blastn 4336 82.4 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
10806567 10806567 PRJNA630162_P_NODE_47869_length_255_cov_1.800971_g46346_i0 PRJNA630162 47869 255 1.800971 4.59247605 Opisthokonta 33154 Nemertea other_Eukaryota 92.8 5.98e-20   NR AKI85311.1 6221 g46346 i0 80.4 7.96470588235294 56 11 65.9 0 7 174 339 394 AKI85311.1 ribosomal protein L3, partial [Cerebratulus lacteus] diamond 2031 92.8 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Cerebratulus Cerebratulus lacteus
15905638 15905638 PRJNA630162_P_NODE_91013_length_191_cov_1.704225_g89490_i0 PRJNA630162 91013 191 1.704225 3.25506975 Lineus longissimus 88925 Nemertea other_Eukaryota 65.8 2.11e-6   NTclustered gi|2724597128|ref|XM_064777673.1| 88925 g89490 i0 95.122 3.42408376963351 41 2 21 0 8 48 1156 1196 PREDICTED: Lineus longissimus protein polybromo-1-like (LOC135491677), transcript variant X10, mRNA blastn 654 65.8 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
28533671 28533671 PRJNA630162_P_NODE_35987_length_298_cov_2.489960_g34464_i0 PRJNA630162 35987 298 2.48996 7.4200808 Lineus longissimus 88925 Nemertea other_Eukaryota 58.2 2.83e-7   NR XP_064621087.1 88925 g34464 i0 45.6 0.573825503355705 57 31 57.4 0 296 126 760 816 XP_064621087.1 uncharacterized protein LOC135483942 [Lineus longissimus] diamond 171 58.2 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
31294084 31294084 PRJNA630162_P_NODE_89615_length_192_cov_1.433566_g88092_i0 PRJNA630162 89615 192 1.433566 2.75244672 Metazoa 33208 Nemertea other_Eukaryota 107 1.47e-25   NR XP_064646399.1 88925 g88092 i0 76.7 2.8125 60 14 93.8 0 184 5 342 401 XP_064646399.1 actin-related protein 3 [Lineus longissimus] diamond 540 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
31914020 31914020 PRJNA630162_P_NODE_161777_length_162_cov_0.920354_g160254_i0 PRJNA630162 161777 162 0.920354 1.49097348 Lineus longissimus 88925 Nemertea other_Eukaryota 52 2.03e-6   NR XP_064641153.1 88925 g160254 i0 50 0.888888888888889 48 24 88.9 0 149 6 38 85 XP_064641153.1 large ribosomal subunit protein eL14-like [Lineus longissimus] diamond 144 52 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;