RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA630162" and tax_phylum = "Fidelibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601941 601941 PRJNA630162_P_NODE_169701_length_154_cov_5.571429_g168178_i0 PRJNA630162 169701 154 5.571429 8.58000066 uncultured Fidelibacterota bacterium HF0010_18O13 710789 Bacteria Bacteria 139 9.43e-29   NTclustered gi|297180711|gb|GU474850.1| 710789 g168178 i0 89.286 81.0779220779221 112 10 72 2 44 154 16769 16659 Uncultured SAR406 cluster bacterium HF0010_18O13 genomic sequence blastn 12486 139 1 Bacteria FCB group Pseudomonadati Fidelibacterota         uncultured Fidelibacterota bacterium HF0010_18O13
28041056 28041056 PRJNA630162_P_NODE_160585_length_162_cov_0.920354_g159062_i0 PRJNA630162 160585 162 0.920354 1.49097348 Bacteria 2 Bacteria Bacteria 82 1.8e-16   NR MBT5759890.1 2026760 g159062 i0 76.9 3.85185185185185 52 12 96.3 0 156 1 836 887 MBT5759890.1 helicase [Fidelibacterota bacterium] diamond 624 82 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29986039 29986039 PRJNA630162_P_NODE_71071_length_212_cov_2.515337_g69548_i0 PRJNA630162 71071 212 2.515337 5.33251444 Fidelibacterota bacterium 2026760 Bacteria Bacteria 56.6 3.21e-7   NR MBC8312411.1 2026760 g69548 i0 45.3 0.75 53 26 70.8 1 153 4 56 108 MBC8312411.1 T9SS type A sorting domain-containing protein [Fidelibacterota bacterium] diamond 159 56.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32072126 32072126 PRJNA630162_P_NODE_111498_length_179_cov_1.330769_g109975_i0 PRJNA630162 111498 179 1.330769 2.38207651 Fidelibacterota bacterium 2026760 Bacteria Bacteria 48.9 1.06e-4   NR MBT4994826.1 2026760 g109975 i0 44.1 5.63128491620112 59 33 98.9 0 178 2 565 623 MBT4994826.1 DUF2341 domain-containing protein [Fidelibacterota bacterium] diamond 1008 48.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32420303 32420303 PRJNA630162_P_NODE_122559_length_173_cov_1.580645_g121036_i0 PRJNA630162 122559 173 1.580645 2.73451585 Fidelibacterota bacterium 46_43 1635280 Bacteria Bacteria 53.1 1.6e-6   NR KUK92035.1 1635280 g121036 i0 51 0.84971098265896 49 24 85 0 26 172 71 119 KUK92035.1 MAG: Uncharacterized protein XE04_0695 [Fidelibacterota bacterium 46_43] diamond 147 53.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium 46_43
32496442 32496442 PRJNA630162_P_NODE_71379_length_212_cov_2.343558_g69856_i0 PRJNA630162 71379 212 2.343558 4.96834296 root 1 Root_unresolved Root_unresolved 46.6 4.88e-4   NR MDC2984488.1 2026760 g69856 i0 60.7 1.82547169811321 28 11 39.6 0 14 97 19 46 MDC2984488.1 Kazal-type serine protease inhibitor domain-containing protein [Fidelibacterota bacterium] diamond 387 46.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;