RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

25 rows where bioproject = "PRJNA630162" and tax_phylum = "Candidatus Parcubacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3153760 3153760 PRJNA630162_P_NODE_99983_length_185_cov_4.029412_g98460_i0 PRJNA630162 99983 185 4.029412 7.4544122 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 178 2.5e-40   NTclustered gi|2650368334|dbj|AP029158.1| 2762014 g98460 i0 87.582 14.172972972973 153 19 83 0 5 157 54091 54243 MAG: Candidatus Parcubacteria bacterium ADS-1 DNA, complete genome blastn 2622 178 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
6979956 6979956 PRJNA630162_P_NODE_115786_length_176_cov_3.551181_g114263_i0 PRJNA630162 115786 176 3.551181 6.25007856 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 278 2.25e-70   NTclustered gi|2874254054|emb|OY970378.1| 2762014 g114263 i0 95.906 170.278409090909 171 7 97 0 5 175 448611 448781 MAG: Candidatus Parcubacteria bacterium isolate MFD01275.bin.c.8 genome assembly, chromosome: 1 blastn 29969 278 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
9530229 9530229 PRJNA630162_P_NODE_145648_length_165_cov_2.620690_g144125_i0 PRJNA630162 145648 165 2.62069 4.3241385 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 274 2.7e-69   NTclustered gi|2650368334|dbj|AP029158.1| 2762014 g144125 i0 97.5 4.61212121212121 160 4 97 0 1 160 54498 54339 MAG: Candidatus Parcubacteria bacterium ADS-1 DNA, complete genome blastn 761 274 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
14630435 14630435 PRJNA630162_P_NODE_121532_length_173_cov_3.540323_g120009_i0 PRJNA630162 121532 173 3.540323 6.12475879 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 261 2.22e-65   NTclustered gi|2650368334|dbj|AP029158.1| 2762014 g120009 i0 94.186 5.89595375722543 172 9 99 1 2 173 54312 54482 MAG: Candidatus Parcubacteria bacterium ADS-1 DNA, complete genome blastn 1020 261 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
14631748 14631748 PRJNA630162_P_NODE_91112_length_191_cov_1.542254_g89589_i0 PRJNA630162 91112 191 1.542254 2.94570514 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 108 3.46e-19   NTclustered gi|2314736631|dbj|AP024682.1| 2762014 g89589 i0 94.286 0.366492146596859 70 4 37 0 1 70 9450 9519 MAG: Candidatus Parcubacteria bacterium KatS3mg098 DNA, complete genome blastn 70 108 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
15904425 15904425 PRJNA630162_P_NODE_120793_length_174_cov_1.456000_g119270_i0 PRJNA630162 120793 174 1.456 2.53344 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 206 1.0599999999999999e-48   NTclustered gi|2874254054|emb|OY970378.1| 2762014 g119270 i0 89.634 15.8965517241379 164 13 93 3 2 163 447027 446866 MAG: Candidatus Parcubacteria bacterium isolate MFD01275.bin.c.8 genome assembly, chromosome: 1 blastn 2766 206 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
16454186 16454186 PRJNA630162_P_NODE_38033_length_289_cov_2.691667_g36510_i0 PRJNA630162 38033 289 2.691667 7.77891763 Bacteria 2 Bacteria Bacteria 139 1.9999999999999997e-28   NTclustered gi|2874254054|emb|OY970378.1| 2762014 g36510 i0 86.26 19.2629757785467 131 15 45 3 1 130 448214 448086 MAG: Candidatus Parcubacteria bacterium isolate MFD01275.bin.c.8 genome assembly, chromosome: 1 blastn 5567 139 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
19727909 19727909 PRJNA630162_P_NODE_100256_length_185_cov_2.625000_g98733_i0 PRJNA630162 100256 185 2.625 4.85625 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 141 3.28e-29   NTclustered gi|2650368334|dbj|AP029158.1| 2762014 g98733 i0 83.333 525.918918918919 156 22 83 4 22 175 53445 53292 MAG: Candidatus Parcubacteria bacterium ADS-1 DNA, complete genome blastn 97295 141 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
23555215 23555215 PRJNA630162_P_NODE_75139_length_207_cov_3.297468_g73616_i0 PRJNA630162 75139 207 3.297468 6.82575876 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 220 4.69e-53   NTclustered gi|2314736631|dbj|AP024682.1| 2762014 g73616 i0 88.172 9.98550724637681 186 21 89 1 16 200 10574 10389 MAG: Candidatus Parcubacteria bacterium KatS3mg098 DNA, complete genome blastn 2067 220 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
26954088 26954088 PRJNA630162_P_NODE_91062_length_191_cov_1.626761_g89539_i0 PRJNA630162 91062 191 1.626761 3.10711351 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 59.7 5.83e-10   NR MEY2671689.1 2762014 g89539 i0 55 0.942408376963351 60 27 94.2 0 11 190 4 63 MEY2671689.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 180 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27346444 27346444 PRJNA630162_P_NODE_112383_length_178_cov_2.341085_g110860_i0 PRJNA630162 112383 178 2.341085 4.1671313 Bacteria 2 Bacteria Bacteria 85.5 2.71e-18   NR KND50186.1 1659197 g110860 i0 69.6 1.8876404494382 56 17 94.4 0 173 6 28 83 KND50186.1 MAG: hypothetical protein AB198_01875 [Parcubacteria bacterium C7867-003] diamond 336 85.5 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-003
27460203 27460203 PRJNA630162_P_NODE_86563_length_194_cov_3.000000_g85040_i0 PRJNA630162 86563 194 3 5.82 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 90.9 1.37e-19   NR MBW3537939.1 2762014 g85040 i0 69 0.896907216494845 58 18 89.7 0 5 178 356 413 MBW3537939.1 cell division protein FtsA [Candidatus Parcubacteria bacterium] diamond 174 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27775988 27775988 PRJNA630162_P_NODE_86504_length_194_cov_3.420690_g84981_i0 PRJNA630162 86504 194 3.42069 6.6361386 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 47.4 2.95e-4   NR MEN9412989.1 2762014 g84981 i0 53.8 0.603092783505155 39 18 60.3 0 120 4 5 43 MEN9412989.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 117 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27807425 27807425 PRJNA630162_P_NODE_131364_length_169_cov_1.216667_g129841_i0 PRJNA630162 131364 169 1.216667 2.05616723 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 52.4 3.77e-7   NR MEY2671690.1 2762014 g129841 i0 73 0.656804733727811 37 10 65.7 0 164 54 25 61 MEY2671690.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 111 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28059676 28059676 PRJNA630162_P_NODE_105645_length_182_cov_1.812030_g104122_i0 PRJNA630162 105645 182 1.81203 3.2978946 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 83.6 3.74e-18   NR MEN9412989.1 2762014 g104122 i0 73.7 0.93956043956044 57 15 94 0 176 6 87 143 MEN9412989.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 171 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28122952 28122952 PRJNA630162_P_NODE_125325_length_171_cov_5.057377_g123802_i0 PRJNA630162 125325 171 5.057377 8.64811467 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 41.2 0.0381   NR RME60816.1 2762014 g123802 i0 48.4 0.543859649122807 31 16 54.4 0 116 24 91 121 RME60816.1 MAG: hypothetical protein D6779_01410 [Candidatus Parcubacteria bacterium] diamond 93 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28343925 28343925 PRJNA630162_P_NODE_125146_length_172_cov_1.162602_g123623_i0 PRJNA630162 125146 172 1.162602 1.99967544 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 47 4.76e-5   NR MEY2671689.1 2762014 g123623 i0 51 0.88953488372093 51 25 89 0 7 159 6 56 MEY2671689.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 153 47 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28388215 28388215 PRJNA630162_P_NODE_133586_length_168_cov_2.647059_g132063_i0 PRJNA630162 133586 168 2.647059 4.44705912 Bacteria 2 Bacteria Bacteria 72.8 3.29e-13   NR KND47610.1 1659200 g132063 i0 63 1.92857142857143 54 20 96.4 0 167 6 137 190 KND47610.1 MAG: hypothetical protein AB201_01605 [Parcubacteria bacterium C7867-006] diamond 324 73.2 0.994535519125683 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-006
28596668 28596668 PRJNA630162_P_NODE_115847_length_176_cov_3.196850_g114324_i0 PRJNA630162 115847 176 3.19685 5.626456 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 51.2 2.03e-6   NR GIW67773.1 2762014 g114324 i0 47.4 0.971590909090909 57 29 95.5 1 174 7 1 57 GIW67773.1 MAG: hypothetical protein KatS3mg096_641 [Candidatus Parcubacteria bacterium] diamond 171 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28944233 28944233 PRJNA630162_P_NODE_164688_length_159_cov_3.209091_g163165_i0 PRJNA630162 164688 159 3.209091 5.10245469 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 40 0.0156   NR MEY4602323.1 2762014 g163165 i0 90 0.377358490566038 20 2 37.7 0 98 39 1 20 MEY4602323.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 60 40 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29512055 29512055 PRJNA630162_P_NODE_132490_length_169_cov_0.866667_g130967_i0 PRJNA630162 132490 169 0.866667 1.46466723 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 81.3 1.21e-16   NR MEY3471005.1 2762014 g130967 i0 74.1 0.958579881656805 54 14 95.9 0 167 6 196 249 MEY3471005.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 162 81.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30428764 30428764 PRJNA630162_P_NODE_94773_length_189_cov_1.142857_g93250_i0 PRJNA630162 94773 189 1.142857 2.15999973 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 74.7 5.96e-15   NR MFM2381326.1 2762014 g93250 i0 63.3 0.777777777777778 49 18 77.8 0 3 149 115 163 MFM2381326.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 147 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31692585 31692585 PRJNA630162_P_NODE_172477_length_152_cov_2.320388_g170954_i0 PRJNA630162 172477 152 2.320388 3.52698976 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 43.9 0.00108   NR KND51121.1 1659195 g170954 i0 44 0.986842105263158 50 28 98.7 0 150 1 51 100 KND51121.1 MAG: hypothetical protein ABA06_02290 [Parcubacteria bacterium C7867-001] diamond 150 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-001
31787237 31787237 PRJNA630162_P_NODE_111217_length_179_cov_1.515385_g109694_i0 PRJNA630162 111217 179 1.515385 2.71253915 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 101 2.8000000000000003e-23   NR MEN9552019.1 2762014 g109694 i0 86 1.92737430167598 57 8 95.5 0 177 7 628 684 MEN9552019.1 gyrase subunit gyrase subunit protein [Candidatus Parcubacteria bacterium] diamond 345 101 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32452169 32452169 PRJNA630162_P_NODE_157279_length_163_cov_0.912281_g155756_i0 PRJNA630162 157279 163 0.912281 1.48701803 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 94.4 4.45e-21   NR MBC7766521.1 2762014 g155756 i0 84.6 0.957055214723926 52 8 95.7 0 2 157 207 258 MBC7766521.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 156 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;