RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA630162" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12080841 12080841 PRJNA630162_P_NODE_112090_length_178_cov_3.186047_g110567_i0 PRJNA630162 112090 178 3.186047 5.67116366 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 106 1.14e-18   NTclustered gi|2874253892|emb|OY970067.1| 991135 g110567 i0 84.685 119.252808988764 111 11 61 5 13 120 4746944 4746837 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 21227 106 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
16454088 16454088 PRJNA630162_P_NODE_19053_length_425_cov_6.074468_g17541_i0 PRJNA630162 19053 425 6.074468 25.816489 Candidatus Methylomirabilis 1170227 Bacteria Bacteria 252 3.76e-62   NTclustered gi|507148395|ref|NR_103198.1| 671143 g17541 i0 77.882 74.6023529411765 425 80 98 11 7 424 1011 1428 Candidatus Methylomirabilis oxyfera 23S ribosomal RNA gene, complete sequence blastn 31706 252 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera
29101841 29101841 PRJNA630162_P_NODE_152308_length_164_cov_0.904348_g150785_i0 PRJNA630162 152308 164 0.904348 1.48313072 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 73.2 1.33e-13   NR HMH31337.1 2072417 g150785 i0 72 0.914634146341463 50 14 91.5 0 158 9 159 208 HMH31337.1 aspartate carbamoyltransferase [Candidatus Methylomirabilota bacterium] diamond 150 73.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32559869 32559869 PRJNA630162_P_NODE_95599_length_188_cov_1.971223_g94076_i0 PRJNA630162 95599 188 1.971223 3.70589924 Bacteria 2 Bacteria Bacteria 58.2 6.46e-8   NR HWN93535.1 2072417 g94076 i0 58.6 4.61170212765957 58 22 92.6 1 1 174 25 80 HWN93535.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 867 58.5 0.994871794871795 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;