RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA630162" and tax_phylum = "Candidatus Hydrogenedentota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
602194 602194 PRJNA630162_P_NODE_34721_length_304_cov_2.082353_g33198_i0 PRJNA630162 34721 304 2.082353 6.33035312 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 359 1.49e-94   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g33198 i0 88.079 64.2269736842105 302 36 99 0 3 304 2443085 2442784 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 19525 359 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
17180619 17180619 PRJNA630162_P_NODE_72854_length_210_cov_3.111801_g71331_i0 PRJNA630162 72854 210 3.111801 6.5347821 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 189 1.35e-43   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g71331 i0 83.495 397.490476190476 206 31 98 2 2 206 2444334 2444131 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 83473 189 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
24827812 24827812 PRJNA630162_P_NODE_128320_length_170_cov_1.809917_g126797_i0 PRJNA630162 128320 170 1.809917 3.0768589 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 169 1.35e-37   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g126797 i0 85.03 497.8 167 23 97 2 5 169 2444166 2444332 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 84626 169 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27112142 27112142 PRJNA630162_P_NODE_129542_length_169_cov_3.825000_g128019_i0 PRJNA630162 129542 169 3.825 6.46425 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 58.9 2.59e-8   NR MCX5771763.1 2030809 g128019 i0 54.2 5.18343195266272 48 21 85.2 1 21 164 596 642 MCX5771763.1 malectin domain-containing carbohydrate-binding protein [Candidatus Hydrogenedentota bacterium] diamond 876 58.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29827795 29827795 PRJNA630162_P_NODE_106911_length_181_cov_2.553030_g105388_i0 PRJNA630162 106911 181 2.55303 4.6209843 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 70.9 1.89e-12   NR MFA6239966.1 3120109 g105388 i0 61.8 0.911602209944751 55 21 91.2 0 167 3 453 507 MFA6239966.1 hypothetical protein [Candidatus Hydrogenedentales bacterium] diamond 165 70.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;