RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA630162" and tax_phylum = "Candidatus Aminicenantota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4430433 4430433 PRJNA630162_P_NODE_85704_length_195_cov_2.650685_g84181_i0 PRJNA630162 85704 195 2.650685 5.16883575 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 159 9.65e-35   NTclustered gi|2874253778|emb|OY969762.1| 2052149 g84181 i0 91.379 88.451282051282 116 10 59 0 68 183 2992814 2992699 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.c.1 genome assembly, chromosome: 1 blastn 17248 159 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
9529952 9529952 PRJNA630162_P_NODE_116748_length_176_cov_1.598425_g115225_i0 PRJNA630162 116748 176 1.598425 2.813228 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 134 5.1500000000000005e-27   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g115225 i0 81.212 49.8295454545455 165 31 94 0 6 170 3675244 3675080 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 8770 134 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
25377845 25377845 PRJNA630162_P_NODE_38260_length_288_cov_3.012552_g36737_i0 PRJNA630162 38260 288 3.012552 8.67614976 Bacillati 1783272 Bacteria Bacteria 80.5 1.22e-10   NTclustered gi|2874254063|emb|OY970122.1| 2052149 g36737 i0 91.525 53.9618055555556 59 3 20 2 129 186 2275080 2275023 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.13 genome assembly, chromosome: 1 blastn 15541 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
32893269 32893269 PRJNA630162_P_NODE_90840_length_191_cov_1.915493_g89317_i0 PRJNA630162 90840 191 1.915493 3.65859163 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 82.8 8.05e-19   NR HDZ27959.1 2052149 g89317 i0 56.7 0.942408376963351 60 26 94.2 0 191 12 28 87 HDZ27959.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 180 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;