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contig_metadata

3 rows where bioproject = "PRJNA630162", tax_clade = "named eukaryotic clones" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • named eukaryotic clones · 3 ✖

bioproject 1

  • PRJNA630162 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1151348 1151348 PRJNA630162_P_NODE_20821_length_404_cov_164.228169_g19304_i0 PRJNA630162 20821 404 164.228169 663.48180276 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 529 1.4699999999999996e-145   NTclustered gi|14579477|gb|AF363207.1| 162600 g19304 i0 90.418 100.113861386139 407 32 99 5 1 402 598 1002 Eukaryote marine clone ME1-24 clone ME1-24 18S ribosomal RNA gene, partial sequence blastn 40446 529 1 Eukaryota named eukaryotic clones             eukaryote marine clone ME1-24
3702786 3702786 PRJNA630162_P_NODE_119523_length_174_cov_4.280000_g118000_i0 PRJNA630162 119523 174 4.28 7.4472 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 187 3.85e-43   NTclustered gi|14579475|gb|AF363205.1| 162566 g118000 i0 94.355 73.8850574712644 124 4 70 3 2 122 479 356 Eukaryote marine clone ANT37-13 clone ANT37-13 18S ribosomal RNA gene, partial sequence blastn 12856 187 1 Eukaryota named eukaryotic clones             eukaryote marine clone ANT37-13
10079794 10079794 PRJNA630162_P_NODE_18268_length_435_cov_6.601036_g16758_i0 PRJNA630162 18268 435 6.601036 28.7145066 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.042   NTclustered gi|193084614|gb|EU795185.1| 542502 g16758 i0 100 0.257471264367816 28 0 6 0 85 112 3303 3330 Uncultured eukaryote HF0200_37F04 genomic sequence blastn 112 52.8 1 Eukaryota named eukaryotic clones             uncultured eukaryote HF0200_37F04

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;