RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA630162", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 13 ✖

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA630162 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9530533 9530533 PRJNA630162_P_NODE_20048_length_413_cov_4.538462_g18534_i0 PRJNA630162 20048 413 4.538462 18.74384806 Salmoxcellia vastator 2874172 SAR_Eukaryotes SAR_Eukaryotes 78.7 6.55e-10   NTclustered gi|2258116978|gb|ON819178.1| 2874172 g18534 i0 82.759 0.210653753026634 87 15 21 0 203 289 4584 4670 Salmoxcellia vastator strain BC241120 internal transcribed spacer region, partial sequence blastn 87 78.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Xcellidae Salmoxcellia Salmoxcellia vastator
15905647 15905647 PRJNA630162_P_NODE_91793_length_190_cov_5.765957_g90270_i0 PRJNA630162 91793 190 5.765957 10.9553183 Tuberlatum coatsi 2497440 SAR_Eukaryotes SAR_Eukaryotes 150 5.629999999999999e-32   NTclustered gi|1538047935|gb|MK309360.1| 2497440 g90270 i0 89.167 66.1473684210526 120 13 63 0 5 124 900 1019 Tuberlatum coatsi strain TUcoa_LOHABE01 large subunit ribosomal RNA gene, partial sequence blastn 12568 150 1 Eukaryota Sar   Perkinsozoa     Parviluciferaceae Tuberlatum Tuberlatum coatsi
17180889 17180889 PRJNA630162_P_NODE_98774_length_186_cov_2.131387_g97251_i0 PRJNA630162 98774 186 2.131387 3.96437982 Salmoxcellia vastator 2874172 SAR_Eukaryotes SAR_Eukaryotes 154 4.24e-33   NTclustered gi|2258116978|gb|ON819178.1| 2874172 g97251 i0 86.014 5.94623655913978 143 20 77 0 7 149 5922 6064 Salmoxcellia vastator strain BC241120 internal transcribed spacer region, partial sequence blastn 1106 154 1 Eukaryota Sar   Perkinsozoa   Perkinsida Xcellidae Salmoxcellia Salmoxcellia vastator
19728680 19728680 PRJNA630162_P_NODE_25656_length_360_cov_18.893891_g24136_i0 PRJNA630162 25656 360 18.893891 68.0180076 uncultured Perkinsea 373149 SAR_Eukaryotes SAR_Eukaryotes 658 0   NTclustered gi|918566068|gb|KP122533.1| 373149 g24136 i0 99.721 100.213888888889 359 1 99 0 2 360 102 460 Uncultured Perkinsea clone BIB6_B2 18S ribosomal RNA gene, partial sequence blastn 36077 658 1 Eukaryota Sar   Perkinsozoa         uncultured Perkinsea
22828799 22828799 PRJNA630162_P_NODE_28618_length_339_cov_5.534483_g27096_i0 PRJNA630162 28618 339 5.534483 18.76189737 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 185 3.0299999999999996e-42   NTclustered gi|22417090|gb|AF509333.1| 32597 g27096 i0 87.898 42.2625368731563 157 19 46 0 5 161 6938 7094 Perkinsus atlanticus 5S ribosomal RNA, small subunit ribosomal RNA genes, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 14327 185 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
23554644 23554644 PRJNA630162_P_NODE_21459_length_397_cov_21.718391_g19941_i0 PRJNA630162 21459 397 21.718391 86.22201227 Salmoxcellia vastator 2874172 SAR_Eukaryotes SAR_Eukaryotes 217 1.27e-51   NTclustered gi|2258116978|gb|ON819178.1| 2874172 g19941 i0 88.043 11.0831234256927 184 21 46 1 209 391 6077 5894 Salmoxcellia vastator strain BC241120 internal transcribed spacer region, partial sequence blastn 4400 217 1 Eukaryota Sar   Perkinsozoa   Perkinsida Xcellidae Salmoxcellia Salmoxcellia vastator
24828904 24828904 PRJNA630162_P_NODE_77500_length_204_cov_2.935484_g75977_i0 PRJNA630162 77500 204 2.935484 5.98838736 Pararosarium dinoexitiosum 2863858 SAR_Eukaryotes SAR_Eukaryotes 128 2.87e-25   NTclustered gi|2074179780|gb|MZ668307.1| 2863858 g75977 i0 82.667 79.3382352941177 150 20 72 6 31 176 969 1116 Pararosarium dinoexitiosum strain PAdin_LOHABE01 large subunit ribosomal RNA gene, partial sequence blastn 16185 128 1 Eukaryota Sar   Perkinsozoa       Pararosarium Pararosarium dinoexitiosum
27681269 27681269 PRJNA630162_P_NODE_152284_length_164_cov_0.904348_g150761_i0 PRJNA630162 152284 164 0.904348 1.48313072 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 53.1 2.68e-6   NR KAF4734972.1 32597 g150761 i0 44.2 1.90243902439024 52 29 95.1 0 7 162 238 289 KAF4734972.1 hypothetical protein FOZ62_007319, partial [Perkinsus olseni] diamond 312 53.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28009559 28009559 PRJNA630162_P_NODE_130245_length_169_cov_2.041667_g128722_i0 PRJNA630162 130245 169 2.041667 3.45041723 root 1 Root_unresolved Root_unresolved 45.4 0.00158   NR KAF4676391.1 330153 g128722 i0 57.1 2.66272189349112 35 15 62.1 0 61 165 606 640 KAF4676391.1 hypothetical protein FOL47_006305 [Perkinsus chesapeaki] diamond 450 45.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
28059767 28059767 PRJNA630162_P_NODE_155965_length_163_cov_0.912281_g154442_i0 PRJNA630162 155965 163 0.912281 1.48701803 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.00665   NR XP_002772932.1 423536 g154442 i0 38 1.84049079754601 50 31 92 0 158 9 462 511 XP_002772932.1 hypothetical protein Pmar_PMAR013275 [Perkinsus marinus ATCC 50983] diamond 300 43.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31262495 31262495 PRJNA630162_P_NODE_113255_length_178_cov_1.387597_g111732_i0 PRJNA630162 113255 178 1.387597 2.46992266 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 49.3 3.05e-5   NR KAF4701249.1 32597 g111732 i0 53.8 3.9438202247191 39 18 65.7 0 8 124 34 72 KAF4701249.1 hypothetical protein FOZ63_016284, partial [Perkinsus olseni] diamond 702 49.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32546991 32546991 PRJNA630162_P_NODE_112879_length_178_cov_1.589147_g111356_i0 PRJNA630162 112879 178 1.589147 2.82868166 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00321   NR KAF4708041.1 32597 g111356 i0 46.9 1.65168539325843 49 25 80.9 1 173 30 924 972 KAF4708041.1 hypothetical protein FOZ63_029828 [Perkinsus olseni] diamond 294 44.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32704191 32704191 PRJNA630162_P_NODE_143280_length_166_cov_0.897436_g141757_i0 PRJNA630162 143280 166 0.897436 1.48974376 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 52.8 3.35e-6   NR KAF4740879.1 32597 g141757 i0 40.4 1.86144578313253 52 31 94 0 157 2 107 158 KAF4740879.1 hypothetical protein FOZ62_024698, partial [Perkinsus olseni] diamond 309 52.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;