RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA630162" and tax_clade = "Provora"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Provora · 15 ✖

bioproject 1

  • PRJNA630162 · 15 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601940 601940 PRJNA630162_P_NODE_169661_length_154_cov_11.380952_g168138_i0 PRJNA630162 169661 154 11.380952 17.52666608 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 156 9.359999999999999e-34   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g168138 i0 86 78.5844155844156 150 15 97 4 6 154 5264 5408 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 12102 156 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
602008 602008 PRJNA630162_P_NODE_19861_length_415_cov_65.163934_g18347_i0 PRJNA630162 19861 415 65.163934 270.4303261 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 292 2.16e-74   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g18347 i0 81.675 73.0530120481928 382 43 88 19 9 375 6936 7305 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 30317 292 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
1878824 1878824 PRJNA630162_P_NODE_79402_length_202_cov_1.339869_g77879_i0 PRJNA630162 79402 202 1.339869 2.70653538 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 52.8 0.018   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g77879 i0 100 0.138613861386139 28 0 14 0 160 187 8864 8837 Ancoracysta twista mitochondrion, complete genome blastn 28 52.8 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
6980443 6980443 PRJNA630162_P_NODE_167086_length_157_cov_2.546296_g165563_i0 PRJNA630162 167086 157 2.546296 3.99768472 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 154 3.45e-33   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g165563 i0 86 103.71974522293 150 14 94 5 8 155 8924 9068 Ancoracysta twista mitochondrion, complete genome blastn 16284 154 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
6980663 6980663 PRJNA630162_P_NODE_30106_length_329_cov_95.646429_g28584_i0 PRJNA630162 30106 329 95.646429 314.67675141 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 156 2.29e-33   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g28584 i0 76.899 52.0060790273556 316 47 95 19 19 329 7322 7028 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 17110 156 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
6981129 6981129 PRJNA630162_P_NODE_76126_length_206_cov_1.949045_g74603_i0 PRJNA630162 76126 206 1.949045 4.0150327 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 143 1.04e-29   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g74603 i0 80.788 1.87864077669903 203 22 97 12 5 204 7065 7253 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 387 143 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
10806333 10806333 PRJNA630162_P_NODE_27989_length_343_cov_18.465986_g26467_i0 PRJNA630162 27989 343 18.465986 63.33833198 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 235 2.9999999999999994e-57   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g26467 i0 89.062 44.9737609329446 192 18 55 3 146 335 7126 6936 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 15426 235 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
12081964 12081964 PRJNA630162_P_NODE_67770_length_215_cov_1.638554_g66247_i0 PRJNA630162 67770 215 1.638554 3.5228911 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 62.1 3.15e-5   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g66247 i0 89.583 0.595348837209302 48 5 22 0 13 60 7241 7194 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 128 62.1 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
14630486 14630486 PRJNA630162_P_NODE_126932_length_171_cov_1.385246_g125409_i0 PRJNA630162 126932 171 1.385246 2.36877066 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 100 5.04e-17   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g125409 i0 82.645 34.5263157894737 121 13 71 4 50 170 5959 6071 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 5904 100 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
17179532 17179532 PRJNA630162_P_NODE_125394_length_171_cov_3.909836_g123871_i0 PRJNA630162 125394 171 3.909836 6.68581956 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 82.4 1.83e-11   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g123871 i0 92.982 1.64912280701754 57 2 32 2 115 169 7197 7253 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 282 82.4 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
17179615 17179615 PRJNA630162_P_NODE_134734_length_168_cov_1.478992_g133211_i0 PRJNA630162 134734 168 1.478992 2.48470656 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 134 4.9000000000000005e-27   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g133211 i0 84.783 2.50595238095238 138 16 81 4 8 143 8238 8104 Ancoracysta twista mitochondrion, complete genome blastn 421 134 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
17180172 17180172 PRJNA630162_P_NODE_33274_length_311_cov_46.709924_g31752_i0 PRJNA630162 33274 311 46.709924 145.26786364 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 150 1e-31   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g31752 i0 77.023 50.5948553054662 309 41 94 21 19 311 7322 7028 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 15735 150 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
17729215 17729215 PRJNA630162_P_NODE_23454_length_378_cov_427.069909_g21936_i0 PRJNA630162 23454 378 427.069909 1614.32425602 Nibbleromonas 3004211 Nibbleridia other_Eukaryota 577 4.7999999999999986e-160   NTclustered gi|2277962432|gb|OP102004.1| 2968503 g21936 i0 94.18 101.246031746032 378 22 100 0 1 378 18 395 Nibbleromonas curacaus strain Cur12 clone 2 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 38271 577 1 Eukaryota Provora   Nibbleridia Nibbleridea Nibbleridida Nibbleridae Nibbleromonas Nibbleromonas curacaus
19728664 19728664 PRJNA630162_P_NODE_24476_length_370_cov_29.012461_g22956_i0 PRJNA630162 24476 370 29.012461 107.3461057 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 176 2e-39   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g22956 i0 82.297 45.5459459459459 209 31 56 6 22 228 6922 7126 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 16852 176 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
23553962 23553962 PRJNA630162_P_NODE_108259_length_180_cov_52.175573_g106736_i0 PRJNA630162 108259 180 52.175573 93.9160314 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 239 1.09e-58   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g106736 i0 90.608 98.4888888888889 181 16 100 1 1 180 2788 2968 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 17728 239 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;