RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA630162" and tax_clade = "Pithoviruses"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 3 ✖

bioproject 1

  • PRJNA630162 · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18454294 18454294 PRJNA630162_P_NODE_39755_length_282_cov_3.090129_g38232_i0 PRJNA630162 39755 282 3.090129 8.71416378 Pithovirus LCDPAC01 2506600 Viruses Viruses 106 1.97e-18   NTclustered gi|1588057929|gb|MK500282.1| 2506600 g38232 i0 87.097 2.35106382978723 93 12 46 0 178 270 17695 17787 MAG: Pithovirus LCDPAC01 genomic sequence blastn 663 106 1 Viruses Pithoviruses             Pithovirus LCDPAC01
23554951 23554951 PRJNA630162_P_NODE_48699_length_253_cov_1.000000_g47176_i0 PRJNA630162 48699 253 1 2.53 Pithovirus LCDPAC01 2506600 Viruses Viruses 117 8.03e-22   NTclustered gi|1588057929|gb|MK500282.1| 2506600 g47176 i0 87.379 1.48221343873518 103 11 42 2 1 102 17683 17784 MAG: Pithovirus LCDPAC01 genomic sequence blastn 375 117 1 Viruses Pithoviruses             Pithovirus LCDPAC01
32420302 32420302 PRJNA630162_P_NODE_122359_length_173_cov_1.669355_g120836_i0 PRJNA630162 122359 173 1.669355 2.88798415 Pithovirus sibericum 1450746 Viruses Viruses 57 1.35e-7   NR YP_009000988.1 1450746 g120836 i0 57.1 0.728323699421965 42 18 72.8 0 168 43 1590 1631 YP_009000988.1 serine-threonine kinase [Pithovirus sibericum] diamond 126 57 1 Viruses Pithoviruses           Alphapithovirus Alphapithovirus sibericum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;