RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA630162", tax_clade = "Caldisericota/Cryosericota group" and tax_kingdom = "Pseudomonadati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pseudomonadati · 2 ✖

tax_clade 1

  • Caldisericota/Cryosericota group · 2 ✖

bioproject 1

  • PRJNA630162 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11354797 11354797 PRJNA630162_P_NODE_30009_length_330_cov_2.825623_g28487_i0 PRJNA630162 30009 330 2.825623 9.3245559 Bacteria 2 Bacteria Bacteria 588 1.9099999999999998e-163   NTclustered gi|2967769|gb|AF050593.1| 74241 g28487 i0 99.383 78.7787878787879 324 2 98 0 7 330 1094 1417 Uncultured eubacterium WCHB1-02 16S ribosomal RNA gene, partial sequence blastn 25997 588 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         uncultured eubacterium WCHB1-02
26605600 26605600 PRJNA630162_P_NODE_111541_length_179_cov_1.307692_g110018_i0 PRJNA630162 111541 179 1.307692 2.34076868 Caldisericia bacterium 2758719 Bacteria Bacteria 97.4 8.68e-22   NR HQJ57121.1 2758719 g110018 i0 87.5 0.93854748603352 56 7 93.9 0 10 177 822 877 HQJ57121.1 hypothetical protein [Caldisericia bacterium] diamond 168 97.4 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia       Caldisericia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;