RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA630162", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Niyogiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Niyogiibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877533 1877533 PRJNA630162_P_NODE_108562_length_180_cov_2.839695_g107039_i0 PRJNA630162 108562 180 2.839695 5.111451 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 182 1.87e-41   NTclustered gi|1950817574|gb|CP066691.1| 2750078 g107039 i0 85.632 611.927777777778 174 24 97 1 4 177 393692 393864 MAG: Candidatus Niyogibacteria bacterium isolate NC_groundwater_707_Ag_S-0.2um_45_26 chromosome blastn 110147 182 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
21003855 21003855 PRJNA630162_P_NODE_113197_length_178_cov_1.418605_g111674_i0 PRJNA630162 113197 178 1.418605 2.5251169 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 139 1.1199999999999999e-28   NTclustered gi|1950817574|gb|CP066691.1| 2750078 g111674 i0 83.333 1.59550561797753 156 21 87 5 19 172 396607 396455 MAG: Candidatus Niyogibacteria bacterium isolate NC_groundwater_707_Ag_S-0.2um_45_26 chromosome blastn 284 139 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;