RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA627467" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA627467 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3150033 3150033 PRJNA627467_P_NODE_15923_length_168_cov_1.621849_g15854_i0 PRJNA627467 15923 168 1.621849 2.72470632 Lobosporangium transversale 64571 Fungi Fungi 58.4 3.03e-4   NTclustered gi|1227131302|ref|XM_022021300.1| 64571 g15854 i0 100 3.83333333333333 31 0 18 0 54 84 139 169 Lobosporangium transversale hypothetical protein (BCR41DRAFT_317952), mRNA blastn 644 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
6977707 6977707 PRJNA627467_P_NODE_5706_length_316_cov_1.483146_g5638_i0 PRJNA627467 5706 316 1.483146 4.68674136 Rhizopus delemar 936053 Fungi Fungi 163 1.31e-35   NTclustered gi|2797480348|ref|XM_067669236.1| 246409 g5638 i0 96.907 0.623417721518987 97 3 62 0 4 100 319 415 Rhizopus delemar RA 99-880 uncharacterized protein (RO3G_14652), partial mRNA blastn 197 163 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
32198729 32198729 PRJNA627467_P_NODE_5958_length_315_cov_2.225564_g5890_i0 PRJNA627467 5958 315 2.225564 7.0105266 Choanephora cucurbitarum 101091 Fungi Fungi 50.1 2.27e-4   NR OBZ82978.1 101091 g5890 i0 89.7 0.276190476190476 29 2 27.6 1 15 101 1 28 OBZ82978.1 DEAD-box ATP-dependent RNA helicase 24 [Choanephora cucurbitarum] diamond 87 50.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Choanephora Choanephora cucurbitarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;