RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA627467" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA627467 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
599170 599170 PRJNA627467_P_NODE_20781_length_155_cov_2.490566_g20712_i0 PRJNA627467 20781 155 2.490566 3.8603773 Littorina saxatilis 31220 Mollusca Mollusca 52.8 0.013   NTclustered gi|2868674675|ref|XM_070346462.1| 31220 g20712 i0 100 0.180645161290323 28 0 18 0 109 136 7491 7518 PREDICTED: Littorina saxatilis dentin sialophosphoprotein-like (LOC138973745), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
24825438 24825438 PRJNA627467_P_NODE_7100_length_248_cov_129.457286_g7031_i0 PRJNA627467 7100 248 129.457286 321.05406928 Physella acuta 109671 Mollusca Mollusca 448 2.4499999999999996e-121   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g7031 i0 99.592 3.33467741935484 245 1 99 0 1 245 3724 3480 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 827 448 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
27378125 27378125 PRJNA627467_P_NODE_12023_length_181_cov_1.454545_g11954_i0 PRJNA627467 12023 181 1.454545 2.63272645 Opisthokonta 33154 Mollusca Mollusca 46.6 6.76e-4   NR XP_046571003.1 36100 g11954 i0 37 6.58011049723757 54 32 89.5 1 170 9 130 181 XP_046571003.1 ankyrin repeat and KH domain-containing protein mask-like [Haliotis rubra] diamond 1191 47 0.991489361702128 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;