contig_metadata
9 rows where bioproject = "PRJNA627467" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8252258 | 8252258 | PRJNA627467_P_NODE_11867_length_181_cov_2.848485_g11798_i0 | PRJNA627467 | 11867 | 181 | 2.848485 | 5.15575785 | Pestivirus bovis | 3052619 | Viruses | Viruses | 300 | 4.970000000000001e-77 | NTclustered | gi|642594|gb|L35849.1|BVDP125B | 11099 | g11798 | i0 | 97.175 | 98.475138121547 | 177 | 5 | 98 | 0 | 5 | 181 | 1642 | 1818 | Bovine viral diarrhea virus (strain Draper) p125 gene, partial cds | blastn | 17824 | 300 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8252427 | 8252427 | PRJNA627467_P_NODE_7327_length_239_cov_2.036842_g7258_i0 | PRJNA627467 | 7327 | 239 | 2.036842 | 4.86805238 | Pestivirus bovis | 3052619 | Viruses | Viruses | 326 | 1.15e-84 | NTclustered | gi|2419860354|dbj|LC727648.1| | 11099 | g7258 | i0 | 91.845 | 97.1757322175732 | 233 | 19 | 97 | 0 | 4 | 236 | 2195 | 1963 | Bovine viral diarrhea virus 1 Tokachi-27 RNA, nearly complete genome | blastn | 23225 | 326 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10079497 | 10079497 | PRJNA627467_P_NODE_9808_length_188_cov_3.100719_g9739_i0 | PRJNA627467 | 9808 | 188 | 3.100719 | 5.82935172 | Pestivirus | 11095 | Viruses | Viruses | 315 | 1.8599999999999999e-81 | NTclustered | gi|1129880133|gb|KX170434.1| | 11099 | g9739 | i0 | 97.283 | 97.8510638297872 | 184 | 5 | 98 | 0 | 5 | 188 | 1423 | 1606 | Bovine viral diarrhea virus 1 isolate V098 NS3 gene, partial cds | blastn | 18396 | 315 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14628071 | 14628071 | PRJNA627467_P_NODE_15252_length_170_cov_1.669421_g15183_i0 | PRJNA627467 | 15252 | 170 | 1.669421 | 2.8380157 | Pestivirus bovis | 3052619 | Viruses | Viruses | 276 | 7.75e-70 | NTclustered | gi|1129879735|gb|KX170235.1| | 11099 | g15183 | i0 | 96.407 | 97.5941176470588 | 167 | 6 | 98 | 0 | 2 | 168 | 530 | 364 | Bovine viral diarrhea virus 1 isolate V087 Erns gene, partial cds | blastn | 16591 | 276 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17177110 | 17177110 | PRJNA627467_P_NODE_18314_length_163_cov_1.350877_g18245_i0 | PRJNA627467 | 18314 | 163 | 1.350877 | 2.20192951 | Pestivirus bovis | 3052619 | Viruses | Viruses | 263 | 5.77e-66 | NTclustered | gi|1129880205|gb|KX170470.1| | 11099 | g18245 | i0 | 96.25 | 98.7546012269939 | 160 | 6 | 98 | 0 | 1 | 160 | 520 | 361 | Bovine viral diarrhea virus 1 isolate V083 NS3 gene, partial cds | blastn | 16097 | 263 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19725688 | 19725688 | PRJNA627467_P_NODE_12596_length_179_cov_1.538462_g12527_i0 | PRJNA627467 | 12596 | 179 | 1.538462 | 2.75384698 | Pestivirus bovis | 3052619 | Viruses | Viruses | 233 | 5.0499999999999995e-57 | NTclustered | gi|2127986396|gb|MW250798.1| | 11099 | g12527 | i0 | 90.805 | 93.2960893854749 | 174 | 16 | 97 | 0 | 5 | 178 | 3058 | 3231 | Bovine viral diarrhea virus 1 strain 62-2, complete genome | blastn | 16700 | 233 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21552754 | 21552754 | PRJNA627467_P_NODE_19957_length_158_cov_4.495413_g19888_i0 | PRJNA627467 | 19957 | 158 | 4.495413 | 7.10275254 | Pestivirus | 11095 | Viruses | Viruses | 237 | 3.36e-58 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g19888 | i0 | 95.302 | 94.297468354430407 | 149 | 7 | 94 | 0 | 5 | 153 | 10566 | 10714 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 14899 | 237 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22276306 | 22276306 | PRJNA627467_P_NODE_19618_length_160_cov_2.846847_g19549_i0 | PRJNA627467 | 19618 | 160 | 2.846847 | 4.5549552 | Allexivirus deltallii | 3433711 | Viruses | Viruses | 84.2 | 4.71e-12 | NTclustered | gi|1722561338|gb|MN059370.1| | 12430 | g19549 | i0 | 79.2 | 1.5625 | 125 | 23 | 77 | 3 | 28 | 150 | 1987 | 1864 | Garlic virus D isolate G45-2, complete genome | blastn | 250 | 84.2 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Allexivirus | Allexivirus deltallii | ||
| 24825340 | 24825340 | PRJNA627467_P_NODE_18320_length_163_cov_1.307018_g18251_i0 | PRJNA627467 | 18320 | 163 | 1.307018 | 2.13043934 | Allexivirus deltallii | 3433711 | Viruses | Viruses | 263 | 5.77e-66 | NTclustered | gi|1722561121|gb|MN059339.1| | 12430 | g18251 | i0 | 95.706 | 23.6319018404908 | 163 | 7 | 100 | 0 | 1 | 163 | 413 | 251 | Garlic virus D isolate G102, complete genome | blastn | 3852 | 263 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Allexivirus | Allexivirus deltallii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;