contig_metadata
15 rows where bioproject = "PRJNA627467", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6977634 | 6977634 | PRJNA627467_P_NODE_18446_length_163_cov_0.894737_g18377_i0 | PRJNA627467 | 18446 | 163 | 0.894737 | 1.45842131 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 226 | 7.559999999999997e-55 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g18377 | i0 | 91.925 | 145.717791411043 | 161 | 13 | 99 | 0 | 3 | 163 | 512251 | 512411 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 23752 | 226 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 12629977 | 12629977 | PRJNA627467_P_NODE_6930_length_256_cov_3.231884_g6861_i0 | PRJNA627467 | 6930 | 256 | 3.231884 | 8.27362304 | Bacteriovorax | 146784 | Bacteria | Bacteria | 436 | 5.5e-118 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g6861 | i0 | 98.016 | 184.78125 | 252 | 4 | 98 | 1 | 5 | 256 | 1660424 | 1660674 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 47304 | 436 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 19725780 | 19725780 | PRJNA627467_P_NODE_20076_length_158_cov_2.605505_g20007_i0 | PRJNA627467 | 20076 | 158 | 2.605505 | 4.1166979 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 250 | 4.31e-62 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g20007 | i0 | 96.078 | 102.689873417722 | 153 | 6 | 97 | 0 | 1 | 153 | 512142 | 511990 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 16225 | 250 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 27870155 | 27870155 | PRJNA627467_P_NODE_19245_length_161_cov_1.785714_g19176_i0 | PRJNA627467 | 19245 | 161 | 1.785714 | 2.87499954 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 99.4 | 1.4000000000000002e-22 | NR | MBL7556203.1 | 2026715 | g19176 | i0 | 84.9 | 1.97515527950311 | 53 | 8 | 98.8 | 0 | 160 | 2 | 537 | 589 | MBL7556203.1 NAD(+) synthase [Pseudobdellovibrionaceae bacterium] | diamond | 318 | 99.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 28028248 | 28028248 | PRJNA627467_P_NODE_9985_length_188_cov_1.294964_g9916_i0 | PRJNA627467 | 9985 | 188 | 1.294964 | 2.43453232 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 92 | 7.76e-20 | NR | HLT23269.1 | 2081706 | g9916 | i0 | 76.3 | 0.941489361702128 | 59 | 14 | 94.1 | 0 | 8 | 184 | 1899 | 1957 | HLT23269.1 carboxypeptidase regulatory-like domain-containing protein [Bacteriovoracaceae bacterium] | diamond | 177 | 92 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 28248972 | 28248972 | PRJNA627467_P_NODE_14746_length_171_cov_6.704918_g14677_i0 | PRJNA627467 | 14746 | 171 | 6.704918 | 11.46540978 | Bdellovibrionia bacterium | 3034169 | Bacteria | Bacteria | 109 | 3.75e-26 | NR | MEO5970544.1 | 3034169 | g14677 | i0 | 89.3 | 1.94736842105263 | 56 | 6 | 98.2 | 0 | 4 | 171 | 236 | 291 | MEO5970544.1 outer membrane protein assembly factor BamA [Bdellovibrionia bacterium] | diamond | 333 | 109 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionia bacterium | |||||
| 28975456 | 28975456 | PRJNA627467_P_NODE_19028_length_161_cov_3.526786_g18959_i0 | PRJNA627467 | 19028 | 161 | 3.526786 | 5.67812546 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 79.3 | 1.3e-16 | NR | MCM2349149.1 | 2081706 | g18959 | i0 | 76.6 | 2.60869565217391 | 47 | 11 | 87.6 | 0 | 161 | 21 | 68 | 114 | MCM2349149.1 arylesterase [Bacteriovoracaceae bacterium] | diamond | 420 | 79.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 28975458 | 28975458 | PRJNA627467_P_NODE_3928_length_316_cov_1.887640_g3860_i0 | PRJNA627467 | 3928 | 316 | 1.88764 | 5.9649424 | Bdellovibrionales bacterium GWB1_55_8 | 1797386 | Bacteria | Bacteria | 51.6 | 7.02e-6 | NR | OFZ19279.1 | 1797386 | g3860 | i0 | 74.2 | 1.13924050632911 | 31 | 8 | 29.4 | 0 | 6 | 98 | 66 | 96 | OFZ19279.1 MAG: hypothetical protein A2X94_05870 [Bdellovibrionales bacterium GWB1_55_8] | diamond | 360 | 51.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium GWB1_55_8 | ||||
| 29291056 | 29291056 | PRJNA627467_P_NODE_18069_length_163_cov_2.921053_g18000_i0 | PRJNA627467 | 18069 | 163 | 2.921053 | 4.76131639 | Bacteriovoracia bacterium | 3058048 | Bacteria | Bacteria | 82.8 | 1.27e-17 | NR | MFP5492236.1 | 3058048 | g18000 | i0 | 75.5 | 0.975460122699387 | 53 | 13 | 97.5 | 0 | 160 | 2 | 165 | 217 | MFP5492236.1 (d)CMP kinase [Bacteriovoracia bacterium] | diamond | 159 | 82.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracia bacterium | |||||
| 29417267 | 29417267 | PRJNA627467_P_NODE_12809_length_178_cov_2.131783_g12740_i0 | PRJNA627467 | 12809 | 178 | 2.131783 | 3.79457374 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 115 | 1.2399999999999998e-29 | NR | HMN69262.1 | 2053517 | g12740 | i0 | 100 | 2.86516853932584 | 57 | 0 | 96.1 | 0 | 173 | 3 | 111 | 167 | HMN69262.1 pyruvate, water dikinase regulatory protein [Bdellovibrionales bacterium] | diamond | 510 | 115 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29764521 | 29764521 | PRJNA627467_P_NODE_16551_length_166_cov_3.572650_g16482_i0 | PRJNA627467 | 16551 | 166 | 3.57265 | 5.930599 | Bacteriovoracia bacterium | 3058048 | Bacteria | Bacteria | 76.6 | 1.42e-14 | NR | MFP5490486.1 | 3058048 | g16482 | i0 | 61.2 | 0.885542168674699 | 49 | 19 | 88.6 | 0 | 164 | 18 | 116 | 164 | MFP5490486.1 TonB-dependent receptor family protein [Bacteriovoracia bacterium] | diamond | 147 | 76.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracia bacterium | |||||
| 30428515 | 30428515 | PRJNA627467_P_NODE_14073_length_174_cov_1.568000_g14004_i0 | PRJNA627467 | 14073 | 174 | 1.568 | 2.72832 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 105 | 3.3200000000000005e-27 | NR | MBC7419218.1 | 28201 | g14004 | i0 | 82.5 | 0.982758620689655 | 57 | 10 | 98.3 | 0 | 3 | 173 | 97 | 153 | MBC7419218.1 DUF1993 domain-containing protein [Bdellovibrio sp.] | diamond | 171 | 105 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 30807318 | 30807318 | PRJNA627467_P_NODE_16174_length_167_cov_2.347458_g16105_i0 | PRJNA627467 | 16174 | 167 | 2.347458 | 3.92025486 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 113 | 6.89e-28 | NR | WP_321394716.1 | 28202 | g16105 | i0 | 92.5 | 2.8562874251497 | 53 | 4 | 95.2 | 0 | 4 | 162 | 208 | 260 | WP_321394716.1 glycine--tRNA ligase [Peredibacter starrii] | diamond | 477 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 30838880 | 30838880 | PRJNA627467_P_NODE_15154_length_170_cov_2.818182_g15085_i0 | PRJNA627467 | 15154 | 170 | 2.818182 | 4.7909094 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 58.9 | 2.71e-8 | NR | MBX3019977.1 | 2026715 | g15085 | i0 | 63.3 | 1.05882352941176 | 60 | 13 | 90 | 1 | 156 | 4 | 2190 | 2249 | MBX3019977.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 180 | 58.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 31249605 | 31249605 | PRJNA627467_P_NODE_12315_length_180_cov_1.389313_g12246_i0 | PRJNA627467 | 12315 | 180 | 1.389313 | 2.5007634 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 114 | 1.98e-28 | NR | MBC7428161.1 | 2608087 | g12246 | i0 | 88.1 | 1.96666666666667 | 59 | 7 | 98.3 | 0 | 177 | 1 | 146 | 204 | MBC7428161.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) [Bacteriovorax sp.] | diamond | 354 | 114 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;