RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA627467", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 23 ✖

tax_kingdom 1

  • Bacillati · 23 ✖

bioproject 1

  • PRJNA627467 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9527556 9527556 PRJNA627467_P_NODE_16628_length_166_cov_2.495726_g16559_i0 PRJNA627467 16628 166 2.495726 4.14290516 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 182 1.7e-41   NTclustered gi|2874254066|emb|OY970149.1| 1672391 g16559 i0 86.957 1.93975903614458 161 21 97 0 6 166 523504 523344 MAG: uncultured Chloroflexia bacterium isolate MFD05747.bin.c.2 genome assembly, chromosome: 1 blastn 322 182 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
9527601 9527601 PRJNA627467_P_NODE_20388_length_156_cov_4.822430_g20319_i0 PRJNA627467 20388 156 4.82243 7.5229908 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 91.3 8.91e-20   NR HEY4190695.1 2952938 g20319 i0 86.3 0.980769230769231 51 7 98.1 0 2 154 262 312 HEY4190695.1 phosphoenolpyruvate carboxylase [Candidatus Limnocylindrales bacterium] diamond 153 91.3 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
10079393 10079393 PRJNA627467_P_NODE_5528_length_316_cov_1.539326_g5460_i0 PRJNA627467 5528 316 1.539326 4.86427016 Bacteria 2 Bacteria Bacteria 135 2.86e-27   NTclustered gi|297181775|gb|GU474878.1| 710736 g5460 i0 92.632 44.8037974683544 95 6 30 1 217 310 9308 9214 Uncultured Chloroflexi bacterium HF0200_09I09 genomic sequence blastn 14158 135 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexi bacterium HF0200_09I09
12078462 12078462 PRJNA627467_P_NODE_10010_length_188_cov_1.136691_g9941_i0 PRJNA627467 10010 188 1.136691 2.13697908 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 56.5 0.001   NTclustered gi|2621713652|emb|OY771913.1| 2024896 g9941 i0 94.595 0.393617021276596 37 0 20 1 5 41 1891097 1891131 MAG: Anaerolineaceae bacterium isolate c74f872c-e933-4053-8305-e1536b6d7914 genome assembly, chromosome: 1 blastn 74 56.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
17177088 17177088 PRJNA627467_P_NODE_15794_length_168_cov_2.436975_g15725_i0 PRJNA627467 15794 168 2.436975 4.094118 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 143 8.139999999999998e-30   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g15725 i0 95.506 40.4285714285714 89 4 53 0 80 168 2760394 2760482 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 6792 143 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
21001508 21001508 PRJNA627467_P_NODE_16457_length_167_cov_0.864407_g16388_i0 PRJNA627467 16457 167 0.864407 1.44355969 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 250 4.63e-62   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g16388 i0 94.444 48.9760479041916 162 9 97 0 4 165 2477024 2476863 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 8179 250 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
22276303 22276303 PRJNA627467_P_NODE_18698_length_162_cov_1.769912_g18629_i0 PRJNA627467 18698 162 1.769912 2.86725744 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 235 1.25e-57   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g18629 i0 93.631 507.191358024691 157 10 97 0 5 161 3523321 3523477 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 82165 235 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
26922422 26922422 PRJNA627467_P_NODE_15722_length_168_cov_3.571429_g15653_i0 PRJNA627467 15722 168 3.571429 6.00000072 Anaerolineae bacterium 2052143 Bacteria Bacteria 102 1.2699999999999999e-23   NR MCA9912041.1 2052143 g15653 i0 80 0.982142857142857 55 11 98.2 0 2 166 36 90 MCA9912041.1 hypothetical protein [Anaerolineae bacterium] diamond 165 102 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
27301956 27301956 PRJNA627467_P_NODE_20223_length_157_cov_3.546296_g20154_i0 PRJNA627467 20223 157 3.546296 5.56768472 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 84 2.89e-17   NR HEX5578742.1 3047546 g20154 i0 91.8 1.89171974522293 49 4 93.6 0 6 152 371 419 HEX5578742.1 NfeD family protein [Candidatus Limnocylindria bacterium] diamond 297 84 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
27649349 27649349 PRJNA627467_P_NODE_19244_length_161_cov_1.785714_g19175_i0 PRJNA627467 19244 161 1.785714 2.87499954 Chloroflexales bacterium 2725990 Bacteria Bacteria 51.6 8.95e-6   NR MEI7644784.1 2725990 g19175 i0 51 0.950310559006211 51 25 95 0 6 158 83 133 MEI7644784.1 glycosyltransferase 87 family protein [Chloroflexales bacterium] diamond 153 51.6 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales     Chloroflexales bacterium
27775738 27775738 PRJNA627467_P_NODE_21244_length_153_cov_2.596154_g21175_i0 PRJNA627467 21244 153 2.596154 3.97211562 Anaerolinea sp. 1872519 Bacteria Bacteria 45.1 0.00171   NR MBA4399520.1 1872519 g21175 i0 67.7 0.607843137254902 31 10 60.8 0 96 4 1 31 MBA4399520.1 YgeY family selenium metabolism-linked hydrolase [Anaerolinea sp.] diamond 93 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.
27851357 27851357 PRJNA627467_P_NODE_4524_length_316_cov_1.730337_g4456_i0 PRJNA627467 4524 316 1.730337 5.46786492 PVC group 1783257 Bacteria Bacteria 74.7 1.92e-13   NR WP_111324576.1 644383 g4456 i0 100 21.3037974683544 33 0 31.3 0 100 2 214 246 WP_111324576.1 phosphosulfolactate synthase [Thermosporothrix hazakensis] diamond 6732 74.7 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Thermosporotrichaceae Thermosporothrix Thermosporothrix hazakensis
28028247 28028247 PRJNA627467_P_NODE_4285_length_316_cov_1.782772_g4217_i0 PRJNA627467 4285 316 1.782772 5.63355952 Chloroflexota bacterium 2026724 Bacteria Bacteria 57 6.85e-7   NR MEW6718017.1 2026724 g4217 i0 81.8 0.939873417721519 33 6 31.3 0 315 217 160 192 MEW6718017.1 site-specific DNA-methyltransferase [Chloroflexota bacterium] diamond 297 57 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28754339 28754339 PRJNA627467_P_NODE_8587_length_202_cov_3.633987_g8518_i0 PRJNA627467 8587 202 3.633987 7.34065374 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 65.5 2.02e-11   NR MEX0762027.1 2026734 g8518 i0 57.4 0.905940594059406 61 26 90.6 0 185 3 1 61 MEX0762027.1 YdeI/OmpD-associated family protein [Dehalococcoidia bacterium] diamond 183 65.5 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
29038777 29038777 PRJNA627467_P_NODE_13468_length_176_cov_1.574803_g13399_i0 PRJNA627467 13468 176 1.574803 2.77165328 Ktedonobacterales bacterium 2306968 Bacteria Bacteria 60.8 2.66e-9   NR HEY7092295.1 2306968 g13399 i0 58.9 0.954545454545455 56 23 95.5 0 174 7 39 94 HEY7092295.1 hypothetical protein [Ktedonobacterales bacterium] diamond 168 60.8 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
29101739 29101739 PRJNA627467_P_NODE_16248_length_167_cov_1.694915_g16179_i0 PRJNA627467 16248 167 1.694915 2.83050805 Chloroflexaceae bacterium 2562117 Bacteria Bacteria 86.3 1.82e-20   NR HMQ30029.1 2562117 g16179 i0 69.8 2.8562874251497 53 16 95.2 0 163 5 34 86 HMQ30029.1 hypothetical protein [Chloroflexaceae bacterium] diamond 477 86.3 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae   Chloroflexaceae bacterium
29114523 29114523 PRJNA627467_P_NODE_11128_length_184_cov_1.459259_g11059_i0 PRJNA627467 11128 184 1.459259 2.68503656 Candidatus Defluviilinea 3140592 Bacteria Bacteria 99.4 9.24e-23   NR MDQ2691053.1 2026724 g11059 i0 75.4 6.96195652173913 61 15 99.5 0 183 1 198 258 MDQ2691053.1 site-2 protease family protein [Chloroflexota bacterium] diamond 1281 99.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29146384 29146384 PRJNA627467_P_NODE_21209_length_153_cov_2.826923_g21140_i0 PRJNA627467 21209 153 2.826923 4.32519219 Bacteria 2 Bacteria Bacteria 41.6 0.0281   NR MFM9108094.1 2026724 g21140 i0 48.6 2.43137254901961 37 19 72.5 0 112 2 1975 2011 MFM9108094.1 SpaA isopeptide-forming pilin-related protein [Chloroflexota bacterium] diamond 372 41.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30333799 30333799 PRJNA627467_P_NODE_5032_length_316_cov_1.632959_g4964_i0 PRJNA627467 5032 316 1.632959 5.16015044 Anaerolineales bacterium 2073117 Bacteria Bacteria 66.2 4.95e-10   NR HJS17107.1 2073117 g4964 i0 90.9 0.617088607594937 33 3 31.3 0 218 316 167 199 HJS17107.1 S9 family peptidase [Anaerolineales bacterium] diamond 195 66.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30460158 30460158 PRJNA627467_P_NODE_10213_length_187_cov_1.659420_g10144_i0 PRJNA627467 10213 187 1.65942 3.1031154 Chloroflexota bacterium 2026724 Bacteria Bacteria 92.8 5.02e-21   NR MEX0710689.1 2026724 g10144 i0 81.8 0.882352941176471 55 10 88.2 0 21 185 8 62 MEX0710689.1 TadE/TadG family type IV pilus assembly protein [Chloroflexota bacterium] diamond 165 92.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30870449 30870449 PRJNA627467_P_NODE_17554_length_164_cov_3.330435_g17485_i0 PRJNA627467 17554 164 3.330435 5.4619134 Anaerolineae bacterium 2052143 Bacteria Bacteria 46.2 7.73e-4   NR MCA9911729.1 2052143 g17485 i0 43.9 0.75 41 23 75 0 2 124 1097 1137 MCA9911729.1 hypothetical protein [Anaerolineae bacterium] diamond 123 46.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32084880 32084880 PRJNA627467_P_NODE_16518_length_166_cov_4.572650_g16449_i0 PRJNA627467 16518 166 4.57265 7.590599 root 1 Root_unresolved Root_unresolved 64.3 3.26e-10   NR MCA9911729.1 2052143 g16449 i0 73.2 5.00602409638554 41 11 74.1 0 35 157 3313 3353 MCA9911729.1 hypothetical protein [Anaerolineae bacterium] diamond 831 64.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32293971 32293971 PRJNA627467_P_NODE_18439_length_163_cov_0.894737_g18370_i0 PRJNA627467 18439 163 0.894737 1.45842131 Chloroflexi bacterium 13_1_4 1805077 Bacteria Bacteria 47 7.52e-5   NR OLC52907.1 1805077 g18370 i0 64.9 0.680981595092024 37 12 68.1 1 3 113 67 102 OLC52907.1 MAG: hypothetical protein AUH85_15430 [Chloroflexi bacterium 13_1_40CM_4_68_4] diamond 111 47 1 Bacteria   Bacillati Chloroflexota         Chloroflexi bacterium 13_1_40CM_4_68_4

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;