contig_metadata
21 rows where bioproject = "PRJNA627467", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1150898 | 1150898 | PRJNA627467_P_NODE_4421_length_316_cov_1.749064_g4353_i0 | PRJNA627467 | 4421 | 316 | 1.749064 | 5.52704224 | Candidatus Moanibacter | 2480624 | Bacteria | Bacteria | 145 | 4.75e-30 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g4353 | i0 | 95.604 | 18.6708860759494 | 91 | 2 | 28 | 1 | 222 | 310 | 594141 | 594051 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 5900 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 5702714 | 5702714 | PRJNA627467_P_NODE_12205_length_180_cov_2.259542_g12136_i0 | PRJNA627467 | 12205 | 180 | 2.259542 | 4.0671756 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 281 | 1.79e-71 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g12136 | i0 | 95.48 | 232.361111111111 | 177 | 7 | 98 | 1 | 5 | 180 | 3861932 | 3861756 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 41825 | 281 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 6977659 | 6977659 | PRJNA627467_P_NODE_20926_length_154_cov_3.704762_g20857_i0 | PRJNA627467 | 20926 | 154 | 3.704762 | 5.70533348 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 191 | 2.57e-44 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g20857 | i0 | 88.961 | 99.7012987012987 | 154 | 17 | 100 | 0 | 1 | 154 | 3920482 | 3920635 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 15354 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10803404 | 10803404 | PRJNA627467_P_NODE_2449_length_316_cov_2.614232_g2381_i0 | PRJNA627467 | 2449 | 316 | 2.614232 | 8.26097312 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 71.3 | 8.17e-8 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g2381 | i0 | 85.333 | 0.569620253164557 | 75 | 3 | 22 | 5 | 25 | 95 | 4019792 | 4019722 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 180 | 71.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 14628043 | 14628043 | PRJNA627467_P_NODE_12892_length_178_cov_1.550388_g12823_i0 | PRJNA627467 | 12892 | 178 | 1.550388 | 2.75969064 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 209 | 8.44e-50 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g12823 | i0 | 88.439 | 21.6741573033708 | 173 | 20 | 97 | 0 | 6 | 178 | 2711 | 2539 | Luteolibacter sp. SL250 chromosome | blastn | 3858 | 209 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 15902068 | 15902068 | PRJNA627467_P_NODE_13333_length_176_cov_2.913386_g13264_i0 | PRJNA627467 | 13333 | 176 | 2.913386 | 5.12755936 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 191 | 3.02e-44 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g13264 | i0 | 87.006 | 61.875 | 177 | 13 | 98 | 7 | 4 | 175 | 3047994 | 3047823 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 10890 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 17177122 | 17177122 | PRJNA627467_P_NODE_19194_length_161_cov_1.785714_g19125_i0 | PRJNA627467 | 19194 | 161 | 1.785714 | 2.87499954 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 182 | 1.64e-41 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g19125 | i0 | 90 | 13.944099378882 | 140 | 14 | 87 | 0 | 18 | 157 | 2372 | 2233 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 2245 | 182 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 26744893 | 26744893 | PRJNA627467_P_NODE_11621_length_182_cov_2.165414_g11552_i0 | PRJNA627467 | 11621 | 182 | 2.165414 | 3.94105348 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 75.9 | 1.2e-16 | NR | ADI16723.1 | 710995 | g11552 | i0 | 72 | 1.45054945054945 | 50 | 14 | 82.4 | 0 | 154 | 5 | 1 | 50 | ADI16723.1 hypothetical protein [uncultured Verrucomicrobiales bacterium HF0010_05E02] | diamond | 264 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | uncultured Verrucomicrobiales bacterium HF0010_05E02 | |||
| 26891015 | 26891015 | PRJNA627467_P_NODE_12341_length_180_cov_1.251908_g12272_i0 | PRJNA627467 | 12341 | 180 | 1.251908 | 2.2534344 | Opitutus sp. ER46 | 2161864 | Bacteria | Bacteria | 108 | 1.04e-25 | NR | WP_107834408.1 | 2161864 | g12272 | i0 | 93.1 | 0.966666666666667 | 58 | 4 | 96.7 | 0 | 5 | 178 | 825 | 882 | WP_107834408.1 valine--tRNA ligase [Opitutus sp. ER46] | diamond | 174 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. ER46 | |
| 26953840 | 26953840 | PRJNA627467_P_NODE_2902_length_316_cov_2.299625_g2834_i0 | PRJNA627467 | 2902 | 316 | 2.299625 | 7.266815 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 75.5 | 1.37e-13 | NR | GBL26153.1 | 2026799 | g2834 | i0 | 93.8 | 1.23417721518987 | 32 | 2 | 30.4 | 0 | 314 | 219 | 150 | 181 | GBL26153.1 hypothetical protein EMGBS8_01010 [Verrucomicrobiota bacterium] | diamond | 390 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27156250 | 27156250 | PRJNA627467_P_NODE_19342_length_161_cov_0.910714_g19273_i0 | PRJNA627467 | 19342 | 161 | 0.910714 | 1.46624954 | Bacteria | 2 | Bacteria | Bacteria | 88.2 | 8.99e-19 | NR | PYL05533.1 | 2026799 | g19273 | i0 | 73.6 | 4.91925465838509 | 53 | 14 | 98.8 | 0 | 159 | 1 | 60 | 112 | PYL05533.1 MAG: hypothetical protein DME34_11235, partial [Verrucomicrobiota bacterium] | diamond | 792 | 88.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27333642 | 27333642 | PRJNA627467_P_NODE_2303_length_316_cov_2.771536_g2235_i0 | PRJNA627467 | 2303 | 316 | 2.7715360000000002 | 8.75805376 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 65.9 | 6.33e-10 | NR | MEP7014928.1 | 2026799 | g2235 | i0 | 93.8 | 3.34177215189873 | 32 | 2 | 30.4 | 0 | 219 | 314 | 214 | 245 | MEP7014928.1 NCS1 family nucleobase:cation symporter-1 [Verrucomicrobiota bacterium] | diamond | 1056 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27586172 | 27586172 | PRJNA627467_P_NODE_20804_length_155_cov_2.339623_g20735_i0 | PRJNA627467 | 20804 | 155 | 2.339623 | 3.62641565 | Spartobacteria bacterium | 2052183 | Bacteria | Bacteria | 73.9 | 2.37e-15 | NR | NBS53893.1 | 2052183 | g20735 | i0 | 92.1 | 0.735483870967742 | 38 | 3 | 73.5 | 0 | 40 | 153 | 1 | 38 | NBS53893.1 DUF2442 domain-containing protein [Spartobacteria bacterium] | diamond | 114 | 73.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Spartobacteria bacterium | ||||
| 27996700 | 27996700 | PRJNA627467_P_NODE_20645_length_155_cov_4.509434_g20576_i0 | PRJNA627467 | 20645 | 155 | 4.509434 | 6.9896227 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 83.6 | 4.54e-17 | NR | MFM2198789.1 | 2026799 | g20576 | i0 | 76 | 0.967741935483871 | 50 | 12 | 96.8 | 0 | 153 | 4 | 908 | 957 | MFM2198789.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 150 | 83.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28009543 | 28009543 | PRJNA627467_P_NODE_14805_length_171_cov_3.598361_g14736_i0 | PRJNA627467 | 14805 | 171 | 3.598361 | 6.15319731 | root | 1 | Root_unresolved | Root_unresolved | 73.6 | 1.89e-13 | NR | WP_205576064.1 | 239935 | g14736 | i0 | 69.2 | 6.35087719298246 | 52 | 14 | 91.2 | 1 | 5 | 160 | 578 | 627 | WP_205576064.1 hypothetical protein [Akkermansia muciniphila] | diamond | 1086 | 74.3 | 0.990578734858681 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 28754340 | 28754340 | PRJNA627467_P_NODE_9307_length_190_cov_2.198582_g9238_i0 | PRJNA627467 | 9307 | 190 | 2.198582 | 4.1773058 | Candidatus Udaeobacter sp. | 2665650 | Bacteria | Bacteria | 97.8 | 1.93e-24 | NR | HEU4772675.1 | 2665650 | g9238 | i0 | 91.9 | 1.95789473684211 | 62 | 5 | 97.9 | 0 | 187 | 2 | 16 | 77 | HEU4772675.1 hypothetical protein [Candidatus Udaeobacter sp.] | diamond | 372 | 97.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Candidatus Udaeobacter | Candidatus Udaeobacter sp. | |
| 28944111 | 28944111 | PRJNA627467_P_NODE_21228_length_153_cov_2.711538_g21159_i0 | PRJNA627467 | 21228 | 153 | 2.711538 | 4.14865314 | Candidatus Udaeobacter sp. | 2665650 | Bacteria | Bacteria | 100 | 2.4599999999999994e-23 | NR | HEV8419696.1 | 2665650 | g21159 | i0 | 89.8 | 1.92156862745098 | 49 | 5 | 96.1 | 0 | 148 | 2 | 31 | 79 | HEV8419696.1 NnrS family protein [Candidatus Udaeobacter sp.] | diamond | 294 | 100 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Candidatus Udaeobacter | Candidatus Udaeobacter sp. | |
| 30491403 | 30491403 | PRJNA627467_P_NODE_9613_length_189_cov_1.821429_g9544_i0 | PRJNA627467 | 9613 | 189 | 1.821429 | 3.44250081 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 75.5 | 5.13e-14 | NR | HXI73658.1 | 2499141 | g9544 | i0 | 63.3 | 0.952380952380952 | 60 | 22 | 95.2 | 0 | 6 | 185 | 168 | 227 | HXI73658.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 180 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 31818925 | 31818925 | PRJNA627467_P_NODE_4697_length_316_cov_1.692884_g4629_i0 | PRJNA627467 | 4697 | 316 | 1.692884 | 5.34951344 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 45.8 | 0.0072 | NR | MFP4157167.1 | 2026772 | g4629 | i0 | 70 | 0.588607594936709 | 30 | 9 | 28.5 | 0 | 314 | 225 | 953 | 982 | MFP4157167.1 chemotaxis protein CheW [Opitutales bacterium] | diamond | 186 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 32135524 | 32135524 | PRJNA627467_P_NODE_10258_length_187_cov_1.376812_g10189_i0 | PRJNA627467 | 10258 | 187 | 1.376812 | 2.57463844 | Roseimicrobium sp. | 3069589 | Bacteria | Bacteria | 75.9 | 2.05e-14 | NR | HSH95181.1 | 3069589 | g10189 | i0 | 55.7 | 1.9572192513369 | 61 | 27 | 97.9 | 0 | 186 | 4 | 101 | 161 | HSH95181.1 DUF6268 family outer membrane beta-barrel protein [Roseimicrobium sp.] | diamond | 366 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. | |
| 32874410 | 32874410 | PRJNA627467_P_NODE_9480_length_189_cov_3.564286_g9411_i0 | PRJNA627467 | 9480 | 189 | 3.564286 | 6.73650054 | Prosthecobacter | 48463 | Bacteria | Bacteria | 71.2 | 6.4e-13 | NR | MFN7563283.1 | 1965333 | g9411 | i0 | 68.1 | 2.23809523809524 | 47 | 15 | 74.6 | 0 | 27 | 167 | 87 | 133 | MFN7563283.1 hypothetical protein [Prosthecobacter sp.] | diamond | 423 | 71.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;