RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA627467", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA627467 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27933434 27933434 PRJNA627467_P_NODE_5145_length_316_cov_1.614232_g5077_i0 PRJNA627467 5145 316 1.614232 5.10097312 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 61.2 1.79e-9   NR HEY9842193.1 2364082 g5077 i0 80.6 0.294303797468354 31 6 29.4 0 315 223 26 56 HEY9842193.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 93 61.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30617623 30617623 PRJNA627467_P_NODE_7893_length_220_cov_3.327485_g7824_i0 PRJNA627467 7893 220 3.327485 7.320467 Vampirovibrionales bacterium 2692181 Bacteria Bacteria 67 1.33e-12   NR MFM7468586.1 2692181 g7824 i0 70 0.545454545454545 40 12 54.5 0 219 100 36 75 MFM7468586.1 MT-A70 family methyltransferase [Vampirovibrionales bacterium] diamond 120 67 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales     Vampirovibrionales bacterium
32103703 32103703 PRJNA627467_P_NODE_14938_length_171_cov_2.098361_g14869_i0 PRJNA627467 14938 171 2.098361 3.58819731 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 125 1.4799999999999998e-31   NR MBX3135409.1 2364082 g14869 i0 98.2 0.964912280701754 55 1 96.5 0 168 4 811 865 MBX3135409.1 PDZ domain-containing protein [Candidatus Obscuribacterales bacterium] diamond 165 125 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32798535 32798535 PRJNA627467_P_NODE_9940_length_188_cov_1.438849_g9871_i0 PRJNA627467 9940 188 1.438849 2.70503612 Candidatus Caenarcanales bacterium 2729995 Bacteria Bacteria 91.3 1.52e-21   NR HEY9847627.1 2729995 g9871 i0 75 1.91489361702128 60 15 95.7 0 185 6 41 100 HEY9847627.1 orange carotenoid protein N-terminal domain-containing protein [Candidatus Caenarcanales bacterium] diamond 360 91.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Candidatus Caenarcanales     Candidatus Caenarcanales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;