RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA627467", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA627467 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23551800 23551800 PRJNA627467_P_NODE_4399_length_316_cov_1.756554_g4331_i0 PRJNA627467 4399 316 1.756554 5.55071064 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 73.1 2.27e-8   NTclustered gi|2518556404|emb|OX638375.1| 2838779 g4331 i0 92.157 0.30379746835443 51 4 16 0 41 91 4019614 4019564 MAG: Candidatus Binatia bacterium isolate 97b5e0c7-6798-4f16-949c-9b63468df6e4 genome assembly, chromosome: 1 blastn 96 73.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29354407 29354407 PRJNA627467_P_NODE_5949_length_315_cov_2.266917_g5881_i0 PRJNA627467 5949 315 2.266917 7.14078855 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 64.7 1.64e-9   NR MFQ5852030.1 2838779 g5881 i0 90.6 0.304761904761905 32 3 30.5 0 97 2 162 193 MFQ5852030.1 type I-C CRISPR-associated protein Cas8c/Csd1 [Candidatus Binatia bacterium] diamond 96 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31452419 31452419 PRJNA627467_P_NODE_16816_length_166_cov_1.324786_g16747_i0 PRJNA627467 16816 166 1.324786 2.19914476 Pseudomonadati 3379134 Bacteria Bacteria 105 2.33e-25   NR HEY7318535.1 2838779 g16747 i0 85.2 2.94578313253012 54 8 97.6 0 5 166 75 128 HEY7318535.1 DUF4105 domain-containing protein [Candidatus Binatia bacterium] diamond 489 105 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;