RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA627467", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

  • Amoebozoa · 3 ✖

bioproject 1

  • PRJNA627467 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10803283 10803283 PRJNA627467_P_NODE_12069_length_181_cov_1.181818_g12000_i0 PRJNA627467 12069 181 1.181818 2.13909058 Stemonitis pallida 2461415 Evosea other_Eukaryota 322 1.06e-83   NTclustered gi|1885992014|gb|MT846406.1| 2461415 g12000 i0 98.889 7.98895027624309 180 2 99 0 1 180 1161 982 Stemonitis pallida isolate 10667 small subunit ribosomal RNA gene, partial sequence blastn 1446 322 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitis Stemonitis pallida
15179208 15179208 PRJNA627467_P_NODE_18992_length_161_cov_4.383929_g18923_i0 PRJNA627467 18992 161 4.383929 7.05812569 Didymium 5792 Evosea other_Eukaryota 102 1.31e-17   NTclustered gi|2687|emb|X60210.1| 5793 g18923 i0 94.118 0.84472049689441 68 2 42 1 90 157 2184 2119 D.iridis LSU rRNA gene blastn 136 102 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
21001447 21001447 PRJNA627467_P_NODE_11077_length_184_cov_1.688889_g11008_i0 PRJNA627467 11077 184 1.688889 3.10755576 Fuligo septica 159720 Evosea other_Eukaryota 316 5.04e-82   NTclustered gi|37515398|emb|AJ584697.1| 159720 g11008 i0 98.343 44.6847826086956 181 1 98 2 1 181 6289 6111 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 8222 316 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;