RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA624323" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA624323 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21552104 21552104 PRJNA624323_P_NODE_4617_length_338_cov_12.392453_g4455_i0 PRJNA624323 4617 338 12.392453 41.88649114 Thalamoporellidae 97292 Bryozoa other_Eukaryota 91.6 6.76e-14   NTclustered gi|2075442530|gb|MZ677793.1| 2865220 g4455 i0 80.672 18.3727810650888 119 22 35 1 187 304 3706 3588 Thalamoporella sp. BLEED1037 large subunit ribosomal RNA gene, partial sequence blastn 6210 91.6 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Thalamoporellidae Thalamoporella Thalamoporella sp. BLEED1037

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;