RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA624323" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA624323 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
596364 596364 PRJNA624323_P_NODE_5761_length_301_cov_0.973684_g5599_i0 PRJNA624323 5761 301 0.973684 2.93078884 Hannaella oryzae 4979 Fungi Fungi 270 7.0999999999999986e-68   NTclustered gi|2835541554|gb|PQ480814.1| 4979 g5599 i0 95.294 4.72757475083056 170 8 56 0 1 170 170 1 Hannaella oryzae isolate 2295.5 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 1423 270 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Hannaella Hannaella oryzae
596367 596367 PRJNA624323_P_NODE_6181_length_289_cov_1.680556_g6019_i0 PRJNA624323 6181 289 1.680556 4.85680684 Malassezia globosa 76773 Fungi Fungi 501 2.21e-137   NTclustered gi|1805972860|gb|CP046440.1| 76773 g6019 i0 97.931 80.7820069204152 290 4 100 2 1 289 678 966 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 23346 501 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
4423975 4423975 PRJNA624323_P_NODE_8784_length_246_cov_0.890173_g8622_i0 PRJNA624323 8784 246 0.890173 2.18982558 Malassezia restricta 76775 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|1546634278|ref|XM_027628799.1| 76775 g8622 i0 100 1 246 0 100 0 1 246 1013 768 Malassezia restricta ribonuclease Z (MRET_2172), partial mRNA blastn 246 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5699923 5699923 PRJNA624323_P_NODE_9365_length_242_cov_0.911243_g9203_i0 PRJNA624323 9365 242 0.911243 2.20520806 Malassezia restricta 76775 Fungi Fungi 296 9.12e-76   NTclustered gi|1546630831|ref|XM_027627076.1| 76775 g9203 i0 100 0.661157024793388 160 0 66 0 1 160 160 1 Malassezia restricta mitotic spindle assembly checkpoint protein MAD2 (MRET_0449), partial mRNA blastn 160 296 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6974817 6974817 PRJNA624323_P_NODE_5746_length_301_cov_2.219298_g5584_i0 PRJNA624323 5746 301 2.219298 6.68008698 Malassezia globosa 76773 Fungi Fungi 555 1.75e-153   NTclustered gi|1805972860|gb|CP046440.1| 76773 g5584 i0 100 91.1661129568106 300 0 99 0 2 301 29972 29673 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 27441 555 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
6974829 6974829 PRJNA624323_P_NODE_8746_length_246_cov_0.890173_g8584_i0 PRJNA624323 8746 246 0.890173 2.18982558 Malassezia restricta 76775 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|1546632412|ref|XM_027627866.1| 76775 g8584 i0 100 1 246 0 100 0 1 246 394 639 Malassezia restricta transcription initiation factor TFIID subunit 7 (MRET_1239), partial mRNA blastn 246 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9524721 9524721 PRJNA624323_P_NODE_10268_length_200_cov_4.850394_g10106_i0 PRJNA624323 10268 200 4.850394 9.700788 Malassezia globosa 76773 Fungi Fungi 370 4.22e-98   NTclustered gi|1321659512|gb|KY911089.1| 76773 g10106 i0 100 8.68 200 0 100 0 1 200 608 409 Malassezia globosa mitochondrion, complete genome blastn 1736 370 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
9524741 9524741 PRJNA624323_P_NODE_8068_length_250_cov_1.355932_g7906_i0 PRJNA624323 8068 250 1.355932 3.38983 Malassezia globosa 76773 Fungi Fungi 457 4.1099999999999985e-124   NTclustered gi|1805972860|gb|CP046440.1| 76773 g7906 i0 99.6 58.712 250 1 100 0 1 250 30544 30295 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 14678 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
12075745 12075745 PRJNA624323_P_NODE_9210_length_243_cov_0.905882_g9048_i0 PRJNA624323 9210 243 0.905882 2.20129326 Malassezia restricta 76775 Fungi Fungi 268 2e-67   NTclustered gi|1546635717|ref|XM_027629501.1| 76775 g9048 i0 99.324 0.876543209876543 148 1 88 0 96 243 429 282 Malassezia restricta serine/threonine-protein kinase (MRET_2874), partial mRNA blastn 213 268 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13350537 13350537 PRJNA624323_P_NODE_3611_length_386_cov_8.370607_g3450_i0 PRJNA624323 3611 386 8.370607 32.31054302 Malassezia restricta 76775 Fungi Fungi 713 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g3450 i0 100 99.0077720207254 386 0 100 0 1 386 1908 1523 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 38217 713 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13350569 13350569 PRJNA624323_P_NODE_8711_length_246_cov_0.890173_g8549_i0 PRJNA624323 8711 246 0.890173 2.18982558 Malassezia restricta 76775 Fungi Fungi 424 4.09e-114   NTclustered gi|1546632062|ref|XM_027627691.1| 76775 g8549 i0 99.569 0.943089430894309 232 1 94 0 15 246 1 232 Malassezia restricta exocyst complex component 5 (MRET_1064), partial mRNA blastn 232 424 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13350573 13350573 PRJNA624323_P_NODE_9071_length_244_cov_0.900585_g8909_i0 PRJNA624323 9071 244 0.900585 2.1974274 Pseudomicrostroma glucosiphilum 1684307 Fungi Fungi 316 7.069999999999998e-82   NTclustered gi|1418639566|ref|XM_025493755.1| 1684307 g8909 i0 90 72.1598360655738 250 17 100 6 1 244 90 337 Pseudomicrostroma glucosiphilum hypothetical protein (BCV69DRAFT_291557), mRNA blastn 17607 316 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Microstromatales   Pseudomicrostroma Pseudomicrostroma glucosiphilum
13350575 13350575 PRJNA624323_P_NODE_9211_length_243_cov_0.905882_g9049_i0 PRJNA624323 9211 243 0.905882 2.20129326 Malassezia restricta 76775 Fungi Fungi 438 1.4399999999999996e-118   NTclustered gi|1546631850|ref|XM_027627585.1| 76775 g9049 i0 99.177 1 243 2 100 0 1 243 5581 5339 Malassezia restricta midasin (MRET_0958), partial mRNA blastn 243 438 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17174248 17174248 PRJNA624323_P_NODE_6214_length_288_cov_1.693023_g6052_i0 PRJNA624323 6214 288 1.693023 4.87590624 Malassezia globosa 76773 Fungi Fungi 527 3.63e-145   NTclustered gi|1805972860|gb|CP046440.1| 76773 g6052 i0 99.653 19.4618055555556 288 1 100 0 1 288 1248 1535 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 5605 527 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
17728027 17728027 PRJNA624323_P_NODE_2014_length_518_cov_2.013483_g1855_i0 PRJNA624323 2014 518 2.013483 10.42984194 Malassezia 55193 Fungi Fungi 952 0   NTclustered gi|1321659621|gb|KY911094.1| 76775 g1855 i0 99.807 77.1814671814672 518 1 100 0 1 518 32513 33030 Malassezia restricta mitochondrion, complete genome blastn 39980 952 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20998674 20998674 PRJNA624323_P_NODE_4657_length_337_cov_4.954545_g4495_i0 PRJNA624323 4657 337 4.954545 16.69681665 uncultured Filobasidiella 1503101 Fungi Fungi 617 2.4999999999999997e-172   NTclustered gi|387156411|emb|HE806144.1| 1503101 g4495 i0 99.703 150.178041543027 337 1 100 0 1 337 1816 1480 Uncultured Filobasidiella partial 26S rRNA gene, clone Ao0Yyyy6 blastn 50610 617 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae   uncultured Filobasidiella
22273504 22273504 PRJNA624323_P_NODE_8638_length_247_cov_0.873563_g8476_i0 PRJNA624323 8638 247 0.873563 2.15770061 Malassezia restricta 76775 Fungi Fungi 457 4.05e-124   NTclustered gi|1546631868|ref|XM_027627594.1| 76775 g8476 i0 100 1 247 0 100 0 1 247 512 758 Malassezia restricta protoporphyrinogen/coproporphyrinogen III oxidase (MRET_0967), partial mRNA blastn 247 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23548876 23548876 PRJNA624323_P_NODE_8319_length_249_cov_0.869318_g8157_i0 PRJNA624323 8319 249 0.869318 2.16460182 Malassezia restricta 76775 Fungi Fungi 438 1.4799999999999996e-118   NTclustered gi|1546634738|ref|XM_027629028.1| 76775 g8157 i0 98.394 1.95983935742972 249 4 100 0 1 249 1511 1263 Malassezia restricta pyruvate kinase (MRET_2401), partial mRNA blastn 488 438 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24102028 24102028 PRJNA624323_P_NODE_9019_length_244_cov_1.163743_g8857_i0 PRJNA624323 9019 244 1.163743 2.83953292 Malassezia 55193 Fungi Fungi 449 6.68e-122   NTclustered gi|1321659599|gb|KY911093.1| 76775 g8857 i0 100 8.76229508196721 243 0 99 0 1 243 289 531 Malassezia restricta mitochondrion, complete genome blastn 2138 449 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24822564 24822564 PRJNA624323_P_NODE_5620_length_304_cov_16.004329_g5458_i0 PRJNA624323 5620 304 16.004329 48.65316016 Malassezia restricta 76775 Fungi Fungi 394 4.09e-105   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g5458 i0 90.82 72.4144736842105 305 13 100 11 1 304 3287 2997 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 22014 394 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
28501797 28501797 PRJNA624323_P_NODE_8147_length_250_cov_0.870056_g7985_i0 PRJNA624323 8147 250 0.870056 2.17514 Phlebiopsis gigantea 11 82310 Fungi Fungi 47.4 9.41e-4   NR KIP05698.1 745531 g7985 i0 42.1 1.428 57 28 68.4 1 175 5 9 60 KIP05698.1 hypothetical protein PHLGIDRAFT_487886 [Phlebiopsis gigantea 11061_1 CR5-6] diamond 357 47.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis gigantea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;