RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA624323" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA624323 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4423949 4423949 PRJNA624323_P_NODE_3164_length_415_cov_1.774854_g3003_i0 PRJNA624323 3164 415 1.774854 7.3656441 Abditibacteriota bacterium 2783868 Bacteria Bacteria 196 1.74e-45   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g3003 i0 88.957 29.2771084337349 163 13 39 5 256 415 2850969 2850809 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 12150 196 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
13350562 13350562 PRJNA624323_P_NODE_8211_length_249_cov_1.619318_g8049_i0 PRJNA624323 8211 249 1.619318 4.03210182 Abditibacteriota bacterium 2783868 Bacteria Bacteria 311 3.37e-80   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g8049 i0 89.328 652.25702811245 253 20 100 7 1 249 2852646 2852397 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 162412 311 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14625292 14625292 PRJNA624323_P_NODE_6672_length_277_cov_1.509804_g6510_i0 PRJNA624323 6672 277 1.509804 4.18215708 Abditibacteriota bacterium 2783868 Bacteria Bacteria 305 1.77e-78   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g6510 i0 86.786 581.664259927798 280 30 100 7 1 277 2851209 2851484 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 161121 305 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
24822566 24822566 PRJNA624323_P_NODE_6080_length_291_cov_4.279817_g5918_i0 PRJNA624323 6080 291 4.279817 12.45426747 Abditibacteriota bacterium 2783868 Bacteria Bacteria 361 3.939999999999999e-95   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g5918 i0 89 417.676975945017 300 22 99 7 2 291 2852018 2851720 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 121544 361 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;