RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA624323", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA624323 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18448451 18448451 PRJNA624323_P_NODE_9055_length_244_cov_0.900585_g8893_i0 PRJNA624323 9055 244 0.900585 2.1974274 Petrosia ficiformis 68564 Porifera other_Eukaryota 115 2.77e-21   NTclustered gi|868477340|gb|KR911863.1| 68564 g8893 i0 78 22.5286885245902 200 33 79 10 53 244 18264 18068 Petrosia ficiformis mitochondrion, complete genome blastn 5497 115 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Petrosiidae Petrosia Petrosia ficiformis
22827562 22827562 PRJNA624323_P_NODE_4618_length_338_cov_7.283019_g4456_i0 PRJNA624323 4618 338 7.283019 24.61660422 Mycale 86015 Porifera other_Eukaryota 110 1.87e-19   NTclustered gi|2304601810|gb|OP458345.1| 2978134 g4456 i0 77.487 50.8343195266272 191 38 56 4 17 205 999 812 Mycale sp. l CD-2022 isolate IML208 large subunit ribosomal RNA gene, partial sequence blastn 17182 110 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Mycalidae Mycale Mycale sp. l CD-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;