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contig_metadata

16 rows where bioproject = "PRJNA624323" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 16 ✖

bioproject 1

  • PRJNA624323 · 16 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1872371 1872371 PRJNA624323_P_NODE_10262_length_200_cov_16.850394_g10100_i0 PRJNA624323 10262 200 16.850394 33.700788 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 370 4.22e-98   NTclustered gi|1095429585|gb|KX465173.1| 187299 g10100 i0 100 80.645 200 0 100 0 1 200 603 802 Uncultured ciliate clone OL16 18S ribosomal RNA gene, partial sequence blastn 16129 370 1 Eukaryota Sar   Ciliophora         uncultured ciliate
6253865 6253865 PRJNA624323_P_NODE_5125_length_320_cov_5.157895_g4963_i0 PRJNA624323 5125 320 5.157895 16.505264 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 586 6.65e-163   NTclustered gi|1837628855|gb|MN158348.1| 5909 g4963 i0 99.688 96.334375 320 1 100 0 1 320 2937 2618 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 30827 586 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
6253870 6253870 PRJNA624323_P_NODE_5585_length_305_cov_8.637931_g5423_i0 PRJNA624323 5585 305 8.637931 26.34568955 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 237 7.31e-58   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5423 i0 97.143 1.37704918032787 140 4 46 0 1 140 2943 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 420 237 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6974820 6974820 PRJNA624323_P_NODE_6846_length_272_cov_5.728643_g6684_i0 PRJNA624323 6846 272 5.728643 15.58190896 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 425 1.28e-114   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g6684 i0 94.853 3.72794117647059 272 14 100 0 1 272 1940 2211 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 1014 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
11353568 11353568 PRJNA624323_P_NODE_4469_length_343_cov_23.537037_g4307_i0 PRJNA624323 4469 343 23.537037 80.73203691 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 601 2.57e-167   NTclustered gi|10782|emb|X54004.1| 5908 g4307 i0 98.251 100.967930029155 343 6 100 0 1 343 1518 1860 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 34632 606 0.991749174917492 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
13350535 13350535 PRJNA624323_P_NODE_3111_length_419_cov_2.494220_g2950_i0 PRJNA624323 3111 419 2.49422 10.4507818 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 769 0   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g2950 i0 99.761 15.7828162291169 419 1 100 0 1 419 212 630 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 6613 769 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
13350552 13350552 PRJNA624323_P_NODE_6851_length_272_cov_3.944724_g6689_i0 PRJNA624323 6851 272 3.944724 10.72964928 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 497 2.67e-136   NTclustered gi|523704203|emb|HE861887.1| 1200497 g6689 i0 99.632 90.7941176470588 272 1 100 0 1 272 281 552 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 24696 497 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
14625308 14625308 PRJNA624323_P_NODE_9272_length_242_cov_4.627219_g9110_i0 PRJNA624323 9272 242 4.627219 11.19786998 Tetrahymena hegewischi 5923 SAR_Eukaryotes SAR_Eukaryotes 401 1.8799999999999994e-107   NTclustered gi|1241841581|gb|KY399445.1| 5923 g9110 i0 97.854 101.96694214876 233 3 95 2 12 242 298 66 Tetrahymena hegewischi isolate 19077-1 large subunit ribosomal RNA gene, partial sequence blastn 24676 401 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena hegewischi
17174243 17174243 PRJNA624323_P_NODE_5094_length_321_cov_6.334677_g4932_i0 PRJNA624323 5094 321 6.334677 20.33431317 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 593 3.9899999999999986e-165   NTclustered gi|1095429585|gb|KX465173.1| 187299 g4932 i0 100 93 321 0 100 0 1 321 21 341 Uncultured ciliate clone OL16 18S ribosomal RNA gene, partial sequence blastn 29853 593 1 Eukaryota Sar   Ciliophora         uncultured ciliate
17728048 17728048 PRJNA624323_P_NODE_9594_length_239_cov_3.710843_g9432_i0 PRJNA624323 9594 239 3.710843 8.86891477 Helicoprorodontidae 1607782 SAR_Eukaryotes SAR_Eukaryotes 71.3 5.93e-8   NTclustered gi|375305434|gb|JF975394.1| 652932 g9432 i0 95.455 20.2677824267782 44 2 18 0 196 239 206 249 Trachelotractus entzi isolate LWW07033111 28S ribosomal RNA gene, partial sequence blastn 4844 71.3 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida   Trachelotractus Trachelotractus entzi
18448437 18448437 PRJNA624323_P_NODE_6075_length_291_cov_12.380734_g5913_i0 PRJNA624323 6075 291 12.380734 36.02793594 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 211 4.2e-50   NTclustered gi|49616744|gb|AY643504.1| 282688 g5913 i0 92.568 47.319587628866 148 9 51 2 2 148 243 97 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 13770 211 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
23548859 23548859 PRJNA624323_P_NODE_4799_length_332_cov_2.347490_g4637_i0 PRJNA624323 4799 332 2.34749 7.7936668 Naviculales sp. 2126271 SAR_Eukaryotes SAR_Eukaryotes 595 1.1499999999999998e-165   NTclustered gi|2633519340|gb|OR805654.1| 2126271 g4637 i0 99.094 197.403614457831 331 3 99 0 1 331 121191 121521 Naviculales sp. strain SZCZO2114 plastid, complete genome blastn 65538 595 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales     Naviculales sp.
24102005 24102005 PRJNA624323_P_NODE_5219_length_317_cov_5.995902_g5057_i0 PRJNA624323 5219 317 5.995902 19.00700934 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 542 1.45e-149   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5057 i0 97.476 8.93375394321767 317 8 100 0 1 317 1525 1841 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2832 542 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24102030 24102030 PRJNA624323_P_NODE_9419_length_241_cov_3.148810_g9257_i0 PRJNA624323 9419 241 3.14881 7.5886321 Navicula 50949 SAR_Eukaryotes SAR_Eukaryotes 440 3.959999999999999e-119   NTclustered gi|2088232843|ref|NC_056794.1| 138539 g9257 i0 99.585 197.979253112033 241 1 100 0 1 241 86131 86371 Navicula veneta isolate SZCZR1826 chloroplast, complete genome blastn 47713 440 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula veneta
24822559 24822559 PRJNA624323_P_NODE_4140_length_358_cov_20.150877_g3978_i0 PRJNA624323 4140 358 20.150877 72.14013966 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 656 0   NTclustered gi|10782|emb|X54004.1| 5908 g3978 i0 99.721 51.6787709497207 358 1 100 0 1 358 3323 2966 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 18501 656 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
24822569 24822569 PRJNA624323_P_NODE_7160_length_265_cov_17.270833_g6998_i0 PRJNA624323 7160 265 17.270833 45.76770745 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 429 9.579999999999999e-116   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6998 i0 95.849 6.22264150943396 265 11 100 0 1 265 332 68 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1649 429 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;