RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA624323", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 1 ✖

tax_clade 1

  • Discoba · 1 ✖

bioproject 1

  • PRJNA624323 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7527963 7527963 PRJNA624323_P_NODE_1006_length_710_cov_4.042386_g857_i0 PRJNA624323 1006 710 4.042386 28.7009406 Cryptaulax 259046 Euglenozoa other_Eukaryota 1301 0   NTclustered gi|41400286|gb|AY425022.1| 259254 g857 i0 99.718 83.4112676056338 710 2 100 0 1 710 816 107 Cryptaulax sp. ATCC 50746 18S ribosomal RNA gene, partial sequence blastn 59222 1301 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cryptaulax Cryptaulax sp. ATCC 50746

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;