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contig_metadata

9 rows where bioproject = "PRJNA624323" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 9 ✖

bioproject 1

  • PRJNA624323 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1872384 1872384 PRJNA624323_P_NODE_5802_length_299_cov_6.212389_g5640_i0 PRJNA624323 5802 299 6.212389 18.57504311 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 497 2.97e-136   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g5640 i0 96.656 5.96655518394649 299 10 100 0 1 299 1926 2224 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1784 497 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3701805 3701805 PRJNA624323_P_NODE_4963_length_326_cov_2.905138_g4801_i0 PRJNA624323 4963 326 2.905138 9.47074988 Naegleria 5761 Heterolobosea other_Eukaryota 603 6.749999999999998e-168   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4801 i0 100 95.1073619631902 326 0 100 0 1 326 375 50 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 31005 603 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7527963 7527963 PRJNA624323_P_NODE_1006_length_710_cov_4.042386_g857_i0 PRJNA624323 1006 710 4.042386 28.7009406 Cryptaulax 259046 Euglenozoa other_Eukaryota 1301 0   NTclustered gi|41400286|gb|AY425022.1| 259254 g857 i0 99.718 83.4112676056338 710 2 100 0 1 710 816 107 Cryptaulax sp. ATCC 50746 18S ribosomal RNA gene, partial sequence blastn 59222 1301 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cryptaulax Cryptaulax sp. ATCC 50746
10800627 10800627 PRJNA624323_P_NODE_5409_length_311_cov_4.584034_g5247_i0 PRJNA624323 5409 311 4.584034 14.25634574 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 575 1.3899999999999995e-159   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g5247 i0 100 25.7877813504823 311 0 100 0 1 311 481 171 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 8020 575 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
10800628 10800628 PRJNA624323_P_NODE_5489_length_308_cov_4.565957_g5327_i0 PRJNA624323 5489 308 4.565957 14.06314756 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 520 6.559999999999998e-143   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g5327 i0 97.087 12.6688311688312 309 8 100 1 1 308 3916 3608 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3902 520 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13904088 13904088 PRJNA624323_P_NODE_6991_length_269_cov_12.540816_g6829_i0 PRJNA624323 6991 269 12.540816 33.73479504 Naegleria 5761 Heterolobosea other_Eukaryota 492 1.23e-134   NTclustered gi|2618963742|gb|OR769034.1| 5762 g6829 i0 99.628 10.1710037174721 269 1 100 0 1 269 5751 5483 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2736 492 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13904090 13904090 PRJNA624323_P_NODE_7431_length_260_cov_2.663102_g7269_i0 PRJNA624323 7431 260 2.663102 6.9240652 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.1 3.94e-5   NTclustered gi|2031946985|emb|OD958550.1| 5763 g7269 i0 100 12.4730769230769 33 0 13 0 149 181 4357 4325 Naegleria fowleri Karachi_NF001 strain blastn 3243 62.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
14625311 14625311 PRJNA624323_P_NODE_9612_length_238_cov_11.381818_g9450_i0 PRJNA624323 9612 238 11.381818 27.08872684 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 435 1.8200000000000003e-117   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g9450 i0 99.58 22.2647058823529 238 1 100 0 1 238 2401 2638 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 5299 435 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
15178561 15178561 PRJNA624323_P_NODE_5552_length_306_cov_3.909871_g5390_i0 PRJNA624323 5552 306 3.909871 11.96420526 Naegleria 5761 Heterolobosea other_Eukaryota 566 8.239999999999998e-157   NTclustered gi|2618963742|gb|OR769034.1| 5762 g5390 i0 100 25.1209150326797 306 0 100 0 1 306 3805 4110 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7687 566 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;