RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA624323", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA624323 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12075748 12075748 PRJNA624323_P_NODE_9790_length_232_cov_6.685535_g9628_i0 PRJNA624323 9790 232 6.685535 15.5104412 Filamoeba nolandi 136452 Evosea other_Eukaryota 399 6.429999999999999e-107   NTclustered gi|57546814|gb|AY714368.1| 136452 g9628 i0 97.835 25.0344827586207 231 5 99 0 2 232 626 856 Filamoeba nolandi strain CCAP1526 small subunit ribosomal RNA gene, complete sequence blastn 5808 399 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
13350550 13350550 PRJNA624323_P_NODE_6671_length_277_cov_1.617647_g6509_i0 PRJNA624323 6671 277 1.617647 4.48088219 uncultured Soliformovum 2510342 Evosea other_Eukaryota 462 9.929999999999999e-126   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g6509 i0 96.751 1 277 9 100 0 1 277 328 52 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 277 462 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;