RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA615351", tax_phylum = "Synergistota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615351 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27093299 27093299 PRJNA615351_P_NODE_114582_length_266_cov_0.965368_g100483_i0 PRJNA615351 114582 266 0.965368 2.56787888 Bacteria 2 Bacteria Bacteria 44.3 0.0143   NR MBQ6969619.1 2053624 g100483 i0 38.9 2.3796992481203 54 23 60.9 1 163 2 672 715 MBQ6969619.1 hypothetical protein [Synergistaceae bacterium] diamond 633 44.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28217071 28217071 PRJNA615351_P_NODE_111866_length_274_cov_1.665272_g97767_i0 PRJNA615351 111866 274 1.665272 4.56284528 Thermovirga lienii 336261 Bacteria Bacteria 45.8 0.00403   NR WP_014163196.1 336261 g97767 i0 60.5 0.843065693430657 43 14 47.1 2 267 139 240 279 WP_014163196.1 polyamine aminopropyltransferase [Thermovirga lienii] diamond 231 45.8 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Thermovirgaceae Thermovirga Thermovirga lienii
31376046 31376046 PRJNA615351_P_NODE_122376_length_244_cov_1.655502_g108276_i0 PRJNA615351 122376 244 1.655502 4.03942488 Synergistaceae bacterium 2053624 Bacteria Bacteria 92.8 8.82e-20   NR HOU33238.1 2053624 g108276 i0 55.8 5.68032786885246 77 34 94.7 0 239 9 99 175 HOU33238.1 S8 family serine peptidase [Synergistaceae bacterium] diamond 1386 92.8 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;