contig_metadata
18 rows where bioproject = "PRJNA615351" and tax_phylum = "Rhodothermota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1871736 | 1871736 | PRJNA615351_P_NODE_27142_length_1215_cov_3.303390_g19764_i0 | PRJNA615351 | 27142 | 1215 | 3.30339 | 40.1361885 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 494 | 5.979999999999999e-168 | NR | WP_012843110.1 | 29549 | g19764 | i0 | 67.4 | 24.3382716049383 | 399 | 124 | 98.5 | 4 | 1 | 1197 | 219 | 611 | WP_012843110.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Rhodothermus marinus] | diamond | 29571 | 496 | 0.995967741935484 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus marinus | |
| 3146737 | 3146737 | PRJNA615351_P_NODE_65723_length_539_cov_12.763889_g52058_i0 | PRJNA615351 | 65723 | 539 | 12.763889 | 68.79736171 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|2621703415|emb|OY762508.1| | 2306054 | g52058 | i0 | 88.704 | 216.317254174397 | 540 | 54 | 99 | 6 | 1 | 537 | 2026131 | 2026666 | MAG: Rhodothermales bacterium isolate 68d32973-4033-4094-87ac-516b823d41a0 genome assembly, chromosome: 1 | blastn | 116595 | 652 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 10078441 | 10078441 | PRJNA615351_P_NODE_146628_length_195_cov_1.575000_g132528_i0 | PRJNA615351 | 146628 | 195 | 1.575 | 3.07125 | Salinibacter | 146918 | Bacteria | Bacteria | 60.2 | 1.01e-4 | NTclustered | gi|1419235469|gb|CP030716.1| | 146919 | g132528 | i0 | 100 | 1.64102564102564 | 32 | 0 | 16 | 0 | 5 | 36 | 681426 | 681457 | Salinibacter ruber strain P13 chromosome, complete genome | blastn | 320 | 60.2 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Salinibacteraceae | Salinibacter | Salinibacter ruber | |
| 12074804 | 12074804 | PRJNA615351_P_NODE_116970_length_258_cov_27.695067_g102871_i0 | PRJNA615351 | 116970 | 258 | 27.695067 | 71.45327286 | Rubrivirga sp. IMCC43871 | 3391575 | Bacteria | Bacteria | 375 | 1.2299999999999998e-99 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g102871 | i0 | 93.676 | 368.143410852713 | 253 | 12 | 97 | 4 | 3 | 253 | 805928 | 806178 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 94981 | 375 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 15898392 | 15898392 | PRJNA615351_P_NODE_120593_length_248_cov_20.849765_g106493_i0 | PRJNA615351 | 120593 | 248 | 20.849765 | 51.7074172 | Rubrivirga sp. IMCC43871 | 3391575 | Bacteria | Bacteria | 366 | 7.05e-97 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g106493 | i0 | 93.852 | 468.173387096774 | 244 | 14 | 98 | 1 | 1 | 243 | 805935 | 806178 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 116107 | 366 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 15898762 | 15898762 | PRJNA615351_P_NODE_54133_length_669_cov_3.479495_g41502_i0 | PRJNA615351 | 54133 | 669 | 3.479495 | 23.27782155 | Rhodocaloribacter litoris | 2558931 | Bacteria | Bacteria | 54.7 | 0.019 | NTclustered | gi|2076465437|gb|CP076718.1| | 2558931 | g41502 | i0 | 96.97 | 0.0493273542600897 | 33 | 0 | 5 | 1 | 281 | 312 | 2845458 | 2845426 | Rhodocaloribacter litoris strain ISCAR-4553 chromosome | blastn | 33 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodocaloribacter | Rhodocaloribacter litoris | |
| 20276370 | 20276370 | PRJNA615351_P_NODE_140016_length_206_cov_1.912281_g125916_i0 | PRJNA615351 | 140016 | 206 | 1.912281 | 3.93929886 | Rubrivirga | 1434037 | Bacteria | Bacteria | 289 | 1.26e-73 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g125916 | i0 | 92.233 | 832.966019417476 | 206 | 13 | 99 | 3 | 1 | 205 | 807006 | 807209 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 171591 | 289 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 25376336 | 25376336 | PRJNA615351_P_NODE_158720_length_178_cov_1.776224_g144620_i0 | PRJNA615351 | 158720 | 178 | 1.776224 | 3.16167872 | Rubrivirga | 1434037 | Bacteria | Bacteria | 235 | 1.39e-57 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g144620 | i0 | 91.279 | 123.573033707865 | 172 | 15 | 97 | 0 | 1 | 172 | 805866 | 805695 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 21996 | 235 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 26985405 | 26985405 | PRJNA615351_P_NODE_18402_length_1535_cov_3.866000_g13303_i0 | PRJNA615351 | 18402 | 1535 | 3.866 | 59.3431 | Rubrivirga sp. IMCC452 | 1885344 | Bacteria | Bacteria | 64.7 | 8.05e-7 | NR | WP_412060949.1 | 3391614 | g13303 | i0 | 29.8 | 0.420195439739414 | 215 | 121 | 41.4 | 9 | 94 | 729 | 278 | 465 | WP_412060949.1 AAA family ATPase [Rubrivirga sp. IMCC45206] | diamond | 645 | 64.7 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC45206 | |
| 28880280 | 28880280 | PRJNA615351_P_NODE_111588_length_275_cov_1.641667_g97489_i0 | PRJNA615351 | 111588 | 275 | 1.641667 | 4.51458425 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 52.8 | 3.82e-6 | NR | HLA63854.1 | 2306054 | g97489 | i0 | 45.6 | 1.25454545454545 | 57 | 30 | 62.2 | 1 | 12 | 182 | 77 | 132 | HLA63854.1 LCCL domain-containing protein [Rhodothermales bacterium] | diamond | 345 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 28911894 | 28911894 | PRJNA615351_P_NODE_9528_length_2081_cov_6.041544_g6329_i1 | PRJNA615351 | 9528 | 2081 | 6.041544 | 125.72453064 | Salisaeta longa | 503170 | Bacteria | Bacteria | 66.2 | 3.04e-7 | NR | WP_051141322.1 | 503170 | g6329 | i1 | 27.1 | 0.387794329649207 | 269 | 164 | 36.5 | 11 | 47 | 805 | 6 | 258 | WP_051141322.1 ATP-binding protein [Salisaeta longa] | diamond | 807 | 66.2 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Salisaetaceae | Salisaeta | Salisaeta longa | |
| 29038608 | 29038608 | PRJNA615351_P_NODE_19208_length_1497_cov_3.400137_g13303_i1 | PRJNA615351 | 19208 | 1497 | 3.400137 | 50.90005089 | Rubrivirga sp. IMCC452 | 1885344 | Bacteria | Bacteria | 64.7 | 7.67e-7 | NR | WP_412060949.1 | 3391614 | g13303 | i1 | 29.8 | 0.430861723446894 | 215 | 121 | 42.5 | 9 | 94 | 729 | 278 | 465 | WP_412060949.1 AAA family ATPase [Rubrivirga sp. IMCC45206] | diamond | 645 | 64.7 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC45206 | |
| 29480167 | 29480167 | PRJNA615351_P_NODE_8870_length_2144_cov_5.735894_g6329_i0 | PRJNA615351 | 8870 | 2144 | 5.735894 | 122.97756736 | Salisaeta longa | 503170 | Bacteria | Bacteria | 66.2 | 3.18e-7 | NR | WP_051141322.1 | 503170 | g6329 | i0 | 27.1 | 0.376399253731343 | 269 | 164 | 35.4 | 11 | 47 | 805 | 6 | 258 | WP_051141322.1 ATP-binding protein [Salisaeta longa] | diamond | 807 | 66.2 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Salisaetaceae | Salisaeta | Salisaeta longa | |
| 31357435 | 31357435 | PRJNA615351_P_NODE_5036_length_2666_cov_17.095781_g732_i6 | PRJNA615351 | 5036 | 2666 | 17.095781 | 455.77352146 | root | 1 | Root_unresolved | Root_unresolved | 120 | 8.05e-24 | NR | MEF8797405.1 | 1885341 | g732 | i6 | 36.1 | 1.77906976744186 | 255 | 145 | 27.7 | 8 | 2573 | 1836 | 506 | 751 | MEF8797405.1 IGHMBP2 family helicase [Salinivenus sp.] | diamond | 4743 | 121 | 0.991735537190083 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Salinibacteraceae | Salinivenus | Salinivenus sp. | |
| 31389117 | 31389117 | PRJNA615351_P_NODE_73696_length_471_cov_2.628440_g59723_i0 | PRJNA615351 | 73696 | 471 | 2.62844 | 12.3799524 | root | 1 | Root_unresolved | Root_unresolved | 50.1 | 8.02e-4 | NR | WP_095511576.1 | 1196024 | g59723 | i0 | 56.3 | 1.80891719745223 | 48 | 21 | 30.6 | 0 | 469 | 326 | 222 | 269 | WP_095511576.1 diaminopimelate epimerase [Rubrivirga marina] | diamond | 852 | 50.1 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga marina | |
| 31976973 | 31976973 | PRJNA615351_P_NODE_23138_length_1344_cov_3.708174_g13303_i2 | PRJNA615351 | 23138 | 1344 | 3.708174 | 49.83785856 | Rubrivirga sp. IMCC452 | 1885344 | Bacteria | Bacteria | 65.5 | 3.43e-7 | NR | WP_412060949.1 | 3391614 | g13303 | i2 | 29.8 | 0.479910714285714 | 215 | 121 | 47.3 | 9 | 245 | 880 | 278 | 465 | WP_412060949.1 AAA family ATPase [Rubrivirga sp. IMCC45206] | diamond | 645 | 65.5 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC45206 | |
| 32420063 | 32420063 | PRJNA615351_P_NODE_186999_length_150_cov_1.730435_g172899_i0 | PRJNA615351 | 186999 | 150 | 1.730435 | 2.5956525 | Rhodothermia bacterium | 2497633 | Bacteria | Bacteria | 62.8 | 5.62e-10 | NR | MBT8400481.1 | 2497633 | g172899 | i0 | 59.2 | 0.98 | 49 | 20 | 98 | 0 | 147 | 1 | 42 | 90 | MBT8400481.1 hypothetical protein [Rhodothermia bacterium] | diamond | 147 | 62.8 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermia bacterium | ||||
| 32609719 | 32609719 | PRJNA615351_P_NODE_70840_length_494_cov_2.599129_g56934_i0 | PRJNA615351 | 70840 | 494 | 2.599129 | 12.83969726 | Rhodothermus sp. | 2591385 | Bacteria | Bacteria | 66.2 | 3.17e-9 | NR | MDQ7039768.1 | 2591385 | g56934 | i0 | 53.8 | 0.917004048582996 | 52 | 24 | 31.6 | 0 | 318 | 473 | 13 | 64 | MDQ7039768.1 ATP-dependent DNA helicase RecQ [Rhodothermus sp.] | diamond | 453 | 66.2 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;