RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA615351" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA615351 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26985528 26985528 PRJNA615351_P_NODE_95662_length_337_cov_1.920530_g81570_i0 PRJNA615351 95662 337 1.92053 6.4721861 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 47.8 0.00184   NR MBI3002232.1 2072417 g81570 i0 39.4 0.881305637982196 99 55 86.4 4 298 8 332 427 MBI3002232.1 molybdopterin-dependent oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 297 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27554193 27554193 PRJNA615351_P_NODE_70144_length_500_cov_1.507527_g56262_i0 PRJNA615351 70144 500 1.507527 7.537635 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 136 2.56e-34   NR HEV8308891.1 2072417 g56262 i0 54.2 5.34 120 55 72 0 363 4 10 129 HEV8308891.1 4-coumarate--CoA ligase family protein [Candidatus Methylomirabilota bacterium] diamond 2670 136 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29808941 29808941 PRJNA615351_P_NODE_61611_length_579_cov_5.272059_g48245_i0 PRJNA615351 61611 579 5.272059 30.52522161 Bacteria 2 Bacteria Bacteria 67 2.95e-9   NR MBZ0169866.1 2211376 g48245 i0 31.2 1.56476683937824 141 96 72.5 1 487 68 242 382 MBZ0169866.1 glycosyltransferase family 4 protein [Candidatus Methylomirabilis lanthanidiphila] diamond 906 67.4 0.99406528189911 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis lanthanidiphila
30870228 30870228 PRJNA615351_P_NODE_146314_length_195_cov_4.081250_g132214_i0 PRJNA615351 146314 195 4.08125 7.9584375 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 60.8 5.23e-9   NR HKW95977.1 2072417 g132214 i0 48.4 2.95384615384615 64 32 98.5 1 2 193 167 229 HKW95977.1 enoyl-CoA hydratase-related protein [Candidatus Methylomirabilota bacterium] diamond 576 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32293747 32293747 PRJNA615351_P_NODE_134159_length_217_cov_1.879121_g120059_i0 PRJNA615351 134159 217 1.879121 4.07769257 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 50.8 1.5e-5   NR HSE92556.1 2072417 g120059 i0 39 1.63133640552995 59 36 81.6 0 26 202 9 67 HSE92556.1 cyclic nucleotide-binding domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 354 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32420034 32420034 PRJNA615351_P_NODE_161539_length_175_cov_1.128571_g147439_i0 PRJNA615351 161539 175 1.128571 1.97499925 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 46.6 6.64e-4   NR HVR37146.1 2072417 g147439 i0 47.7 2.43428571428571 44 23 75.4 0 35 166 638 681 HVR37146.1 carbohydrate-binding domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 426 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;