RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA615351" and tax_phylum = "Candidatus Margulisiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615351 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26827343 26827343 PRJNA615351_P_NODE_148241_length_192_cov_12.777070_g134141_i0 PRJNA615351 148241 192 12.77707 24.5319744 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 45.8 0.00154   NR NQY75404.1 2053573 g134141 i0 53.1 0.5 32 15 50 0 171 76 2 33 NQY75404.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 96 45.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
27111898 27111898 PRJNA615351_P_NODE_186782_length_150_cov_2.078261_g172682_i0 PRJNA615351 186782 150 2.078261 3.1173915 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 42 0.0201   NR NQY75404.1 2053573 g172682 i0 47.2 0.72 36 19 72 0 114 7 5 40 NQY75404.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 108 42 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
29038517 29038517 PRJNA615351_P_NODE_104088_length_301_cov_2.048872_g89989_i0 PRJNA615351 104088 301 2.048872 6.16710472 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 43.9 0.0161   NR MFC1770672.1 2053573 g89989 i0 45.2 0.418604651162791 42 23 41.9 0 3 128 27 68 MFC1770672.1 tetratricopeptide repeat protein [Candidatus Margulisiibacteriota bacterium] diamond 126 43.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
31407739 31407739 PRJNA615351_P_NODE_180476_length_155_cov_2.508333_g166376_i0 PRJNA615351 180476 155 2.508333 3.88791615 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 42 0.021   NR NQY75404.1 2053573 g166376 i0 41 0.754838709677419 39 23 75.5 0 4 120 2 40 NQY75404.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 117 42 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
32040329 32040329 PRJNA615351_P_NODE_19958_length_1466_cov_4.305381_g14466_i0 PRJNA615351 19958 1466 4.305381 63.11688546 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 47.8 0.0249   NR MFC1770672.1 2053573 g14466 i0 47.7 0.0900409276944066 44 23 9 0 13 144 27 70 MFC1770672.1 tetratricopeptide repeat protein [Candidatus Margulisiibacteriota bacterium] diamond 132 47.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
32515095 32515095 PRJNA615351_P_NODE_115659_length_262_cov_2.634361_g101560_i0 PRJNA615351 115659 262 2.634361 6.90202582 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 46.2 0.00152   NR MFC1770672.1 2053573 g101560 i0 46.3 0.469465648854962 41 22 46.9 0 2 124 27 67 MFC1770672.1 tetratricopeptide repeat protein [Candidatus Margulisiibacteriota bacterium] diamond 123 46.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;